XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCCAAATCCGCGNAATTCC
CCANAAAATTTCAAGTTCATGATGCCTCAATGTCGGGTGGGCACAGAGCC
AAATCTATCTGCTTTGGTCTTCCTTTGGAAGAGGATGGGGTGTCTAGCGG
GAGAGAGGAGTTGGTGGGTATTAAGGAGGGGGCTGGGAGAGAACTGGCTT
ANNAAATTTTANNCATTAATGNCTAAATATGAANTGNTCAAGTTCCTCAC
CATCTTCTTTCATCAAACNTGAANTTCANTGACCAAAAAAANNTTGAATA
AANCCATGAAGCCTCTAACACTCAAGGCCAATCCATGCTCTCTGTGAAAA
CNCCTTTTGTTTTGNTTTCANTTTGTTTGTTTGCTTTTGTTTTTCACCTC
NAANNNAAATAATTTTTTTGCAAGGNTCCACCAAAATCTTTTACCAATTT
TGGCCTTTTTAGNNTCAGGAATAAAATCTTTATCAAACCTTAATTGAAAA
TAGAAACTAANNAANCCCNNAAAATCTGGAATTTANATAAATTTNAAAAC
CGATCCTTAANNNGAATATTTTCTTTAAACTTCTCCCNCCCTTTCCAACC
TTTTTATTTCCAAACCCCACCTATATTTAACCCCTAAAAATTACAAAAAA
CTTAAACCCCCAAAGAATACAACCCAAATAAAATTAACCCAATTCTGAAC
CTTTTNAAAATTTTTAATTCACTTTTAATAAAAAAACTTTAAAAATAATT
ATTTG

CGATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTCTGTAGACCAGGGTGACCTAGAACT
CAGATCCTCCTGTCTCTGCCTCCTCTCTGCTGGGATTAAAGGCGTGCACC
ACCACCAGCTGTCTCTAAAACACTTTTCATAAGGAAACTGGAGGTGTTTC
TGAGATCAATTAATTGTGAGATTATTGCTCACATTCTCACGGTATACTCT
TTGATTTGATTTTTTTTAAAATGAGTGTGATTATGCATTTAGATTAACAT
GTGCATTTAGATAGTTTACCAACATTCTTTTGAAAAGTAATTTAATAAAA
TGTCTGGAGATCTAGAGTGAAAGACTCATCAGAACACACTGAGCAATTTC
AAAATAATTTTGTTGAGTATAAATAATATTTCGAATATTATTTTAAATAG
CTTAGTACTGGAGCACATGAGAGTTTGCCCCCTTTATTCTGAAGTGACGC
TGGTGAAGTTTCTCCCCTGGGCACTAAGCAGGTCTTAGTTTCCAGGGGTC
TGAACCTCCATGCCACAGTTCTGGCTATGGGCCCATACCTTATAAAGTCT
GTCTTCCTTTTCTTAGAATGTGTGTTTCATAAAGCATGATGGGTGTTCAC
ATGTGTTCCCGTGTGTTCCTCTGTGTGTTTGTGCGTGTGTGTGTGTGTGT
GTGTGCATGTGC

Query= MSMg01no117_d24.g1 MSMg01no117_d24.g1 CHROMAT_FILE:
MSMg01no117_d24.g1 PHD_FILE: MSMg01no117_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:44 2005
         (610 letters)



>mm_chr4_84965374_84966382
          Length = 1009

 Score = 1102 bits (570), Expect = 0.0
 Identities = 597/606 (98%), Gaps = 1/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctgtagaccagggtgacctagaactcagatcctcctgtctctgcctcctctctgctg 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctgtagaccagggtgacctagagctcagatcctcctgtctctgcctcctctctgctg 260

                                                                       
Query: 61  ggattaaaggcgtgcaccaccaccagctgtctctaaaacacttttcataaggaaactgga 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ggattaaaggcgtgcaccaccaccagctgtctctaaaacactttttataaggaaactgga 320

                                                                       
Query: 121 ggtgtttctgagatcaattaattgtgagattattgctcacattctcacggtatactcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgtttctgagatcaattaattgtgagattattgctcacattctcacggtatactcttt 380

                                                                       
Query: 181 gatttgattttttttaaaatgagtgtgattatgcatttagattaacatgtgcatttagat 240
           ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gatttgatttttttt-aaatgagtgtgattatgcatctagattaacatgtgcatttagat 439

                                                                       
Query: 241 agtttaccaacattcttttgaaaagtaatttaataaaatgtctggagatctagagtgaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agtttaccaacattcttttgaaaagtaatttaataaaatgtctggagatctagagtgaaa 499

                                                                       
Query: 301 gactcatcagaacacactgagcaatttcaaaataattttgttgagtataaataatatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gactcatcagaacacactgagcaatttcaaaataattttgttgagtataaataatatttc 559

                                                                       
Query: 361 gaatattattttaaatagcttagtactggagcacatgagagtttgccccctttattctga 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaatattattttaaatagcttagtactggagcacatgagagtttgccccctttattctga 619

                                                                       
Query: 421 agtgacgctggtgaagtttctcccctgggcactaagcaggtcttagtttccaggggtctg 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtgacgctggtgaagtttttcccctgggcactaagcaggtcttagtttccaggggtctg 679

                                                                       
Query: 481 aacctccatgccacagttctggctatgggcccataccttataaagtctgtcttccttttc 540
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 aacctccatgccacagttctggctatgggcctataccttataaagtctgtcttccttttc 739

                                                                       
Query: 541 ttagaatgtgtgtttcataaagcatgatgggtgttcacatgtgttcccgtgtgttcctct 600
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 740 ttagaatgtgtgtttcataaagcatgatgggtgttaacatgtgttcctgtgtgttcctct 799

                 
Query: 601 gtgtgt 606
           ||||||
Sbjct: 800 gtgtgt 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1009
Length adjustment: 10
Effective length of query: 600
Effective length of database: 999
Effective search space:   599400
Effective search space used:   599400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)