Query= MSMg01no117_f16.b1 MSMg01no117_f16.b1 CHROMAT_FILE:
MSMg01no117_f16.b1 PHD_FILE: MSMg01no117_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:53 2005
(505 letters)
>mm_chr4_26660881_26661785
Length = 905
Score = 866 bits (448), Expect = 0.0
Identities = 484/506 (95%), Gaps = 18/506 (3%)
Strand = Plus / Minus
Query: 1 ggtcctaaataacattaccaaactaaatagaataaggaatgaactctgcttgctgacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ggtcctaaataacattaccaaactaaatagaataaggaatgaactctgcttgctgacacc 471
Query: 61 cagttgctattaactgtgaattaaactgaattgccctcagtcagattctggataagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cagttgctattaactgtgaattaaactgaattgccctcagtcagattctggataagagaa 411
Query: 121 aggacagaagcaagacaaaattagcaaccaatttcattatttcttatactggaaaactaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 410 aggacagaagcaagacaaaattagcaaccaatttcattatttcttatactgggaaactaa 351
Query: 181 caacccataaccaagagaagggaattaggggaaatgtagaaagatatttagtgtgaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caacccataaccaagagaagggaattaggggaaatgtagaaagatatttagtgtgaaggc 291
Query: 241 tatcataagaacaaaagctgtaaatttgtttagtatcaacaaaaaggtaaaactgcatgt 300
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aaacacaagaacaaaagctgtaaatttgtttagtatcaacaaaaaggtaaaactgcatgt 231
Query: 301 attaggaacaaaagaatgaataaatctataggggagggacacatataattgaaaaggaaa 360
|||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 230 attaggaacaaaagaatgaataaatctata--------------ata---gaaaaggaaa 188
Query: 361 aaaataaacagctttccctaaggacaaaaggaaataaccaggagctaagctg-aaaacca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 187 aaaataaacagctttccctaaggacaaaaggaaataaccaggagctaagctgaaaaacca 128
Query: 420 catgactttgtgtatatctagtttcgtagctataaatttgaaaactcatattttatattg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 catgactttgtgtatatctagtttcgtagctataaatttgaaaactcatattttatattg 68
Query: 480 acatttataatttacctattaagaga 505
||||||||||||||||||||||||||
Sbjct: 67 acatttataatttacctattaagaga 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_f16.g1 MSMg01no117_f16.g1 CHROMAT_FILE:
MSMg01no117_f16.g1 PHD_FILE: MSMg01no117_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:53 2005
(518 letters)
>mm_chr4_26583238_26584154
Length = 917
Score = 284 bits (147), Expect = 8e-81
Identities = 159/163 (97%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 1 aatttttatttagatgattcactaggtttttcttgattggtttaagtttcgtcagaattt 60
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aatttttatttagatgattcgctaggtttttcttgattggtttaagttt-gtcagaattt 259
Query: 61 tgactctgtactatgattaataaattgattatctttttattgtttcattaccttttatct 120
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 260 tgactctgtactatgattaataaatttattatctttttattgtttcattactttttatct 319
Query: 121 acatagtttaaacatttatctagtgttgaatattttaaatctt 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acatagtttaaacatttatctagtgttgaatattttaaatctt 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space: 460756
Effective search space used: 460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
