TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGATCCGCGGAAT
TCAACAACTCATTCAAAGAAATACAGGAGAACACTGCTAAAGAGTTACAA
GTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTCCTTAA
AGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTCCTTATAGAAAAAC
AGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGAC
CTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCGACGCT
GGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGCCAGCATCA
GCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTCC
ATAGAAAACATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGAT
CCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACC
TACGGATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCA
GCAAACATCTTCAACAAAATTATTGAAGAAAACTTCCCAAATCTAAAGAA
AGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGG
ACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACACCAAATGCA
CTAAATAAAGATAGAATACTAAAAGCAGTAAGGGA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGTGGAAGTGCACTGAGGACTTTCAAC
TTCCTTTATCTTTACCAAACTCCACTCTAGTAAAGCCAGATGCCTGGCTT
TGCCACAGGAAAGAATTTCAGGGTGAGCCAGTATGAAGTAAAGTTAAAGT
TTATGTTAAAAAAAAACTTTAAAATTTGTATTTTTGGAATCAATTCTCTC
CATGTGGGTTCCAAGAATGGAACTAAGATCATTTGGCTTGACAGCAAGCA
TCTTTGCTCACTGATCCATCTCATCAGCCCTTAAAAGATTCTTTAAACCA
ATTTAAAAACAGGTTACTAGAAAGAGAGGTACCTTAGAAAGAAAGTCATA
CATACTTAAGATCTTGTGATTTCTCAAAAAGAGTCAGACTACATGTGTAC
ATTAGCTGTGTATGTTAGCATTGGTGGCTTCTGACTTTACATCCCAAGGG
GTTATTTCGGGGGTTCCATCCCACAATCAGCCACTAAACCCAGACACTAT
TGCATATACCAGCAAGATTTTGCTGAAGGGACCCTGATATAGCTGTCTCT
TATGAGGCTATGCCAATGCCTGGCAAATACAGAAGTGGATGCTCACAGTC
ATCTATCTATAGGATGGAACACAGAGCCCCCAATGGAGAAGCTAGAGAAA
GCACCCAAGGCACTGAAGGGGTCTGCAACCC

Query= MSMg01no117_m18.g1 MSMg01no117_m18.g1 CHROMAT_FILE:
MSMg01no117_m18.g1 PHD_FILE: MSMg01no117_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:27 2005
         (645 letters)



>mm_chr4_49423988_49425032
          Length = 1045

 Score = 1210 bits (626), Expect = 0.0
 Identities = 641/646 (99%), Gaps = 2/646 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtggaagtgcactgaggactttcaacttcctttatctttaccaaactccactctagtaaa 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gtggaagtgcactgaggacttccaacttcctttatctttaccaaactccactctagtaaa 833

                                                                       
Query: 61  gccagatgcctggctttgccacaggaaagaatttcagggtgagccagtatgaagtaaagt 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 832 gccagatgcctggctttgccacaggaaagaatttcaggctgagccagtatgaagtaaagt 773

                                                                       
Query: 121 taaagtttatgtt-aaaaaaaaactttaaaatttgtatttttggaatcaattctctccat 179
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 taaagtttatgttaaaaaaaaaactttaaaatttgtatttttggaatcaattctctccat 713

                                                                       
Query: 180 gtgggttccaagaatggaactaagatcatttggcttgacagcaagcatctttgctcactg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gtgggttccaagaatggaactaagatcatttggcttgacagcaagcatctttgctcactg 653

                                                                       
Query: 240 atccatctcatcagcccttaaaagattctttaaaccaatttaaaaacaggttactagaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atccatctcatcagcccttaaaagattctttaaaccaatttaaaaacaggttactagaaa 593

                                                                       
Query: 300 gagaggtaccttagaaagaaagtcatacatacttaagatcttgtgatttctcaaaaagag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gagaggtaccttagaaagaaagtcatacatacttaagatcttgtgatttctcaaaaagag 533

                                                                       
Query: 360 tcagactacatgtgtacattagctgtgtatgttagcattggtggcttctgactttacatc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tcagactacatgtgtacattagctgtgtatgttagcattggtggcttctgactttacatc 473

                                                                       
Query: 420 ccaaggggttatttcgggggttccatcccacaatcagccactaaacccagacactattgc 479
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ccaaggggttatttc-ggggatccatcccacaatcagccactaaacccagacactattgc 414

                                                                       
Query: 480 atataccagcaagattttgctgaagggaccctgatatagctgtctcttatgaggctatgc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atataccagcaagattttgctgaagggaccctgatatagctgtctcttatgaggctatgc 354

                                                                       
Query: 540 caatgcctggcaaatacagaagtggatgctcacagtcatctatctataggatggaacaca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caatgcctggcaaatacagaagtggatgctcacagtcatctatctataggatggaacaca 294

                                                         
Query: 600 gagcccccaatggagaagctagagaaagcacccaaggcactgaagg 645
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gagcccccaatggagaagctagagaaagcacccaaggcactgaagg 248


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)