Query= MSMg01no117_o02.b1 MSMg01no117_o02.b1 CHROMAT_FILE:
MSMg01no117_o02.b1 PHD_FILE: MSMg01no117_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:34 2005
(636 letters)
>mm_chr4_52659670_52660705
Length = 1036
Score = 1222 bits (632), Expect = 0.0
Identities = 635/636 (99%)
Strand = Plus / Plus
Query: 1 tagcttaaagtcagctaaagaagtaagcctgcaccaccgagtcaacttaccatcaagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcttaaagtcagctaaagaagtaagcctgcaccaccgagtcaacttaccatcaagcta 260
Query: 61 ccgacacgaggctctgaaaactggctgtgttactgtatagatgggagagcttcaaagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgacacgaggctctgaaaactggctgtgttactgtatagatgggagagcttcaaagtaa 320
Query: 121 gtaggtcacattatatccatagtaaaaacaggcacttgtatatattacttggagttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaggtcacattatatccatagtaaaaacaggcacttgtatatattacttggagttataa 380
Query: 181 ataaaccagtataagaattaagtagctaggaataataaaagtagggagatgttgaatata 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ataaaccagtataagaattaagtagctaggaataacaaaagtagggagatgttgaatata 440
Query: 241 ttacatgcatacttttcttaggcacaatcttcagttatctaaaacagattagtccagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacatgcatacttttcttaggcacaatcttcagttatctaaaacagattagtccagaag 500
Query: 301 atagatttcagcatatttttaaaataactatgctaaaatatctgttcatttaatattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagatttcagcatatttttaaaataactatgctaaaatatctgttcatttaatattgat 560
Query: 361 tcagctcttgctctgtgcatatgttactttaacacagctaagattacaaaaataaacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagctcttgctctgtgcatatgttactttaacacagctaagattacaaaaataaacaca 620
Query: 421 catgaactgtcatagtgaatatgaataaataatttgtgaatttaaatttacgaaaaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catgaactgtcatagtgaatatgaataaataatttgtgaatttaaatttacgaaaaaatt 680
Query: 481 gtagacatttgttaggtgtgtgtagtgttcattttttagcagtttctacattaattagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtagacatttgttaggtgtgtgtagtgttcattttttagcagtttctacattaattagtt 740
Query: 541 tctgtgaaatcttgctaatgtccctattaagtaaatagtatacaagagcccctttaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgtgaaatcttgctaatgtccctattaagtaaatagtatacaagagcccctttaaaaa 800
Query: 601 ttaaagggagaaaggaagggtacatttgttgcacag 636
||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttaaagggagaaaggaagggtacatttgttgcacag 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_o02.g1 MSMg01no117_o02.g1 CHROMAT_FILE:
MSMg01no117_o02.g1 PHD_FILE: MSMg01no117_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:34 2005
(173 letters)
>mm_chr4_52751310_52751883
Length = 574
Score = 311 bits (161), Expect = 1e-89
Identities = 164/165 (99%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 1 agctttgaaagatg-cacatatgagatcacaccatactcttcatatttgagtcagtatga 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agctttgaaagatgtcacatatgagatcacaccatactcttcatatttgagtcagtatga 268
Query: 60 tgcctgacacttacgtcataatttcacataatttctctttcggaagaagggatattattc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgcctgacacttacgtcataatttcacataatttctctttcggaagaagggatattattc 208
Query: 120 cattgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 164
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cattgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 574
Length adjustment: 8
Effective length of query: 165
Effective length of database: 566
Effective search space: 93390
Effective search space used: 93390
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
