Query= MSMg01no119_g12.b1 MSMg01no119_g12.b1 CHROMAT_FILE:
MSMg01no119_g12.b1 PHD_FILE: MSMg01no119_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:32 2005
(479 letters)
>mm_chr4_45368904_45369785
Length = 882
Score = 803 bits (415), Expect = 0.0
Identities = 450/463 (97%), Gaps = 4/463 (0%)
Strand = Plus / Minus
Query: 1 cactgtccaagtcaaaacagtgttgtataattttaaagattcaaactaaaaaaccacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cactgtccaagtcaaaacagtgttgtataattttaaagattcaaactaaaaaaccacaaa 579
Query: 61 aagaattttttctccatttatttagctttatgcaaattctcagaatggattgaatcttt- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aagaattttttctccatttatttagctttatgcaaattctcagaatggattgaatctttt 519
Query: 120 --ttgttgttgttgtttttggtataatttttgcaatgaaattataatcgaatatgcaata 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgttgttgttgttgtttttggtataatttttgcaatgaaattataatcgaatatgcaata 459
Query: 178 tgatatcctcactttcttttgagttttgtactataataaaatcacttttccataaatcct 237
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 458 tgatatcctcactttcttttgagttttgtactgtaataaaatcacttttccataaatcct 399
Query: 238 caaatttcatctattgtctcacaagagcaagttaagatattcacaaaattttaagtgtct 297
||| ||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 398 caactttcatcaactgtctcacaagagcaagttaagatattcacagaattctaagtgtct 339
Query: 298 cctgtatcgttatttctatcaccttgtttttctgaggttttctctctcagatcctctatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cctgtatcgttatttctatcaccttgtttttctgaggttttctctctcagatcctctatt 279
Query: 358 gccaatgatttatatgtatcttgaccaattctccaaaatcactttcagggttttgtggaa 417
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 278 gccaatgatttatatgtgtcttgaccaattctccaaaatcaccttcagggttttgtggaa 219
Query: 418 ttacacatgaaaaaaaaaatgtgtgtgtgtgtgtgtgtgtgtg 460
||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 218 ttacacatg-aaaaaaaaatgtgtgtgtgtgtgtgtgtatgtg 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 882
Length adjustment: 10
Effective length of query: 469
Effective length of database: 872
Effective search space: 408968
Effective search space used: 408968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_g12.g1 MSMg01no119_g12.g1 CHROMAT_FILE:
MSMg01no119_g12.g1 PHD_FILE: MSMg01no119_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:32 2005
(250 letters)
>mm_chr4_45198929_45199578
Length = 650
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 tggtgtagccggagcgaagttgagaacgagatacctgagcgtgtgtgatagaaggtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgtagccggagcgaagttgagaacgagatacctgagcgtgtgtgatagaaggtgaga 260
Query: 61 tttgtcccactgcccagtatcttgtgctgcaattagtgcgccccagtgagagacacctcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 261 tttgtcccactgcccagtatcttgtgctgcaattagtgcgccccagtgagaaacatctcg 320
Query: 121 tggaagcagttttgtttgatttccttcctagacatgctggttttcggtttcaggctttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaagcagttttgtttgatttccttcctagacatgctggttttcggtttcaggctttcg 380
Query: 181 gaagtcagaagtctggggagagggagttttgtgacagggtggggttgtgatacctgcgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagtcagaagtctggggagagggagttttgtgacagggtggggttgtgatacctgcgtt 440
Query: 241 tgcctttcc 249
|||||||||
Sbjct: 441 tgcctttcc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
