NTTTTTTTTNTTNTTTTTTTTTTTTTCTTAACCTTTTTTTTTTCCAATAC
TTTTCATAACTTTAAATTTTCCAATACCCTACCCTTATCCTTATCTATTT
CTATTTACCCCTAATAATTTTCCTTTCCCCCCCCCCTTTTATCTGCAAGG
ATAGAAAAATNCCCCAGCACTACAGCAAAAAAGGGNNGGGNCNACNNNNN
AAANNNGGGCCNNCCCGGATTTNNCAGAACNNNGACCTAACGGGGGTGCG
CCCAGCGNGGNNNTTCTATAATTGGGCGCTAAAGACTACTATATCAGAGG
AGCGCGGAAATCCTCANNTCTTGCTAAATACATGGCTGCATCAGGATATG
GTCTCAATTAAAGCAACTCTTAAAAGTGGGTGGGTACCTTACAAGCCAAG
TGGGGTGGGAATCCTTTTAAAGGAAAAAAAGGGGTCCAAAAGGGGGGTTC
CCAACCTTGGGTTTCCCCACTGGGAAAGGCTTTTTTAAATTTGGGGGGGA
AAAAAAAATCCGGGGGGGGAAAGCAAAAAATN

ACCCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATCGTTGGGTTCTGACAGCT
GTGTATGAGTACTGACTTAGACTGCTCCCTAACTTCCCATCCTCCTGGGG
TACCTTGTTTGGTAGGGCCTTAATCCTCAGCCTTGTCTATATAATTGGTG
TTCTTGTTTTCCTATAGGAAAACTTGTAAATTACTGCTGTGTGTGTGCTT
TGACCGTTACATATGTTGCAAACGTCTTTAGGACAGTGACCTAAAGCTGA
ATTTCTTTATCCTAGCGCTCTTACATAGTCATGCACTTGGAAAACACTGC
CTTTCAACTTTACAGAAGACTCGCTAGGCTTGGGAAGGTTTCAAGGCCCC
CAAGAGACACTTGATGATTCTAGGTATCCTGATTTTGAGCTGTTAAAAAT
CATGGTTATCTGATACTCATATTCTAAGTTCCATGCCCCAATGTAGTTAG
AGGCCAGGTGTAAATACTTTAAATTTTTTTCTGACTTTGACAGCTAGAGA
AATGGCTCCGCGGTTAAGAGGACTCGCTGCTCAGTGGACCTAATTCGGCA
CCTATCTCAGGCAGCTCACATCCACAGCGATCTGCCTGTGATGACAGGGC
AGTGTCACCAACTGCACTCTGCATACAGCCATGTGCAGG

Query= MSMg01no119_n04.g1 MSMg01no119_n04.g1 CHROMAT_FILE:
MSMg01no119_n04.g1 PHD_FILE: MSMg01no119_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:05 2005
         (468 letters)



>mm_chr4_83129993_83130860
          Length = 868

 Score =  876 bits (453), Expect = 0.0
 Identities = 465/469 (99%), Gaps = 2/469 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcgttgggttctgacagctgtgtatgagtactgacttagactgctccctaacttccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 catcgttgggttctgacagctgtgtatgagtactgacttagactgctccctaacttccca 609

                                                                       
Query: 61  tcctcctggggtaccttgtttggtagggccttaatcctcagccttgtctatataattggt 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 608 tcctcctggggtaccttgtttggtagagccttaatcctcagccttgtctatataattggt 549

                                                                       
Query: 121 gttcttgttttcctataggaaaacttgtaaattactgctgtgtgtgtgctttgaccgtta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gttcttgttttcctataggaaaacttgtaaattactgctgtgtgtgtgctttgaccgtta 489

                                                                       
Query: 181 catatgttgcaaacgtctttaggacagtgacctaaagctgaatttctttatcctagc-gc 239
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct: 488 catatgttgcaaacgtctttagggcagtgacctaaagctgaatttctttatcct-gctgc 430

                                                                       
Query: 240 tcttacatagtcatgcacttggaaaacactgcctttcaactttacagaagactcgctagg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcttacatagtcatgcacttggaaaacactgcctttcaactttacagaagactcgctagg 370

                                                                       
Query: 300 cttgggaaggtttcaaggcccccaagagacacttgatgattctaggtatcctgattttga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cttgggaaggtttcaaggcccccaagagacacttgatgattctaggtatcctgattttga 310

                                                                       
Query: 360 gctgttaaaaatcatggttatctgatactcatattctaagttccatgccccaatgtagtt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctgttaaaaatcatggttatctgatactcatattctaagttccatgccccaatgtagtt 250

                                                            
Query: 420 agaggccaggtgtaaatactttaaatttttttctgactttgacagctag 468
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agaggccaggtgtaaatactttaaatttttttctgactttgacagctag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)