TTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTATCTCCTCCCCCTCCCCCTGCTCCCCAACCTACCCACTCCT
GCTTCTTGGCCCTAGCATTCCCCTATACTGGGGCATAGAGCCTTCACAGG
ACCAAGGGCCTCTCCTACCATTGATGACTGACTAGGCCATCCTCTGCTAC
ATATGCAGCTAGAGCCATGAGACCCACCATGTGTTTTCTTTGATTGGTGG
TTTAGTTCCAAGAAGCTCTGGAGGTACTGGTTAGTTCATATTGTTGTTCC
TCCTATGGGGCTGCAAACCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTC
TTTCGTTGGGGACCCTGTGCTCTGTCCAATGGATGGCTGTGAGCATCCAC
TTCTGTATTTGCCAGGAGAAGCTTTTTAAAAAAAAGACAAAAACACCCCC
CCCAAAAAAAACTGAGGAGCAGGTGAAAAGGGAAAGGTACCCATACATTC
ACCCACTCAGACACAAGACCATGCTAACAATGTCTGGCCTTTTGCAGCAT
CTCCTTCAGAATTTTCTAGGCATGGTTTTGCAGCCAACATTCCTGTTCAA
CAATTTATCAGGAATCGTTTTAAACCTTGAGATAAACTTCTATGTAATTT
ACAAAAATTGCAGACTATTCTGTTATATGAATCATACCGTTTATTTACCA
ATCTTATCTTT

CTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCAGTCATGCTGACAGGGGCTGGGA
GTGGGGGGCAGGAGCTGCCAGGGAACAGAGCAAAGCCTGAACTCTGGGAA
GCTGGGAAGAATAACTAGCTTGGTTTTGAGCGAGGCGACCCCTTGAGCCA
GACTAACAGGCCACAGATTCCCGGGGCTTGTTTCAAATTGCACCAAACAA
TGACTGGGAAACGTTGACCTTCGGTCTCCCCCTGGCTTTTCTTTTAAAAA
GCTGTGAACAATCATATACAGTTTTATGGTGTTTATATATATATATATAT
ATATATATATATATATATATATATATATATAAATACATATATATATATAG
AATCTCTATTACTCTATCCCTCTCTTCCCTCCCCCCCGTTCGTCCCCCAT
TCCTGTTTTTCCCTTATTCGCTTTACTTTATTGTTCTTTCCTTCCCTCAT
TCACTTTCCTTCCTTTTTCCTCCTTCCTCTCTCGTCTCTCTATCCTTTCC
TCCCCCTCTTCTTCCCCCCCTCCCGTTCCATTCCATATTTTTCTATTTCC
GTTCGCCTCTTCCCCTTCTTCCCATTCCCCCCTATTCTTCCTCCCTGTTT
TTCCCCTTCCCCCTTTATTCACCTTTATTCTGACCTCCACTCTAATACCC
TGATAGTATTTCTATCGCCCTCTTT

Query= MSMg01no119_p06.g1 MSMg01no119_p06.g1 CHROMAT_FILE:
MSMg01no119_p06.g1 PHD_FILE: MSMg01no119_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:14 2005
         (328 letters)



>mm_chr4_105048862_105049589
          Length = 728

 Score =  582 bits (301), Expect = e-171
 Identities = 322/333 (96%), Gaps = 8/333 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcagtcatgctgacaggggctgggagtggggggcaggagctgccagggaacagagcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atcagtcatgctgacaggggctgggagtggggggcaggagctgccagggaacagagcaaa 400

                                                                       
Query: 61  gcctgaactctgggaagctgggaagaataactagcttggttttgagcgaggcgacccctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcctgaactctgggaagctgggaagaataactagcttggttttgagcgaggcgacccctt 340

                                                                       
Query: 121 gagccagactaacaggccacagattcccggggcttgtttcaaattgcaccaaacaatgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gagccagactaacaggccacagattcccggggcttgtttcaaattgcaccaaacaatgac 280

                                                                       
Query: 181 tgggaaacgttgaccttcggtctccccctggcttttcttttaaaaagctgtgaacaatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgggaaacgttgaccttcggtctccccctggcttttcttttaaaaagctgtgaacaatca 220

                                                                       
Query: 241 tatacagttttatggtgtttatatatatatatatatata----tatata----tatatat 292
           |||||||||||||||||||||||||||||||||||||||    || |||    |||||||
Sbjct: 219 tatacagttttatggtgtttatatatatatatatatatacacatacatacacatatatat 160

                                            
Query: 293 atatatatatatataaatacatatatatatata 325
           ||||||||||||||| ||| |||||||||||||
Sbjct: 159 atatatatatatatatatatatatatatatata 127



 Score = 91.6 bits (47), Expect = 6e-23
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                          
Query: 261 atatatatatatatatatatatatatatatatatatatatatatata 307
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatata 166



 Score = 91.6 bits (47), Expect = 6e-23
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                          
Query: 260 tatatatatatatatatatatatatatatatatatatatatatatat 306
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 81.9 bits (42), Expect = 5e-20
 Identities = 63/74 (85%), Gaps = 8/74 (10%)
 Strand = Plus / Plus

                                                                       
Query: 260 tatatatatatatatatatatatatatatatatatatatat----atatat----aaata 311
           |||||||||||||||||||||||||||||||||||||||||    || |||    | |||
Sbjct: 127 tatatatatatatatatatatatatatatatatatatatatgtgtatgtatgtgtatata 186

                         
Query: 312 catatatatatata 325
            |||||||||||||
Sbjct: 187 tatatatatatata 200



 Score = 78.1 bits (40), Expect = 7e-19
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 269 atatatatatatatatatatatatatatatatatatataaatacatat 316
           ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 78.1 bits (40), Expect = 7e-19
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 271 atatatatatatatatatatatatatatatatatataaatacatatat 318
           ||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 78.1 bits (40), Expect = 7e-19
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 273 atatatatatatatatatatatatatatatatataaatacatatatat 320
           ||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 78.1 bits (40), Expect = 7e-19
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 275 atatatatatatatatatatatatatatatataaatacatatatatat 322
           ||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 78.1 bits (40), Expect = 7e-19
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 277 atatatatatatatatatatatatatatataaatacatatatatatat 324
           ||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatatat 167



 Score = 76.1 bits (39), Expect = 3e-18
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 279 atatatatatatatatatatatatatataaatacatatatatatata 325
           ||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 120 atatatatatatatatatatatatatatatatatatatatatatata 166


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 153
Number of extensions: 41
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 11
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space:   229361
Effective search space used:   229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)