Query= MSMg01no121_a11.b1 MSMg01no121_a11.b1 CHROMAT_FILE:
MSMg01no121_a11.b1 PHD_FILE: MSMg01no121_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:40 2005
(243 letters)
>mm_chr4_85303341_85303982
Length = 642
Score = 433 bits (224), Expect = e-126
Identities = 238/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 cacatgcccatggnagtggggatattcctgatggagaaaaacagtgaggtaaattaagaa 60
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cacatgcccatggcagtggggatattcctgatggagaaaaacaatgaggtaaattaagaa 260
Query: 61 agagctctggctttggttaaatccccaaggttttacaagtccacaccatccgtttgcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagctctggctttggttaaatccccaaggttttacaagtccacaccatccgtttgcaat 320
Query: 121 ccctgcacggcttaatactccagatataggattgaaacccctttgtgagccatctgctaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctgcaaggcttaatactccagatataggattgaaacccctttgtgagccatctgctaa 380
Query: 181 tagctaagctttcatgttttgtttttgtatttttttatgcttaaaaatacaccattaact 240
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcaaagctttcatgttttgtttt-gtatttttttatgcttaaaaatacaccattaact 439
Query: 241 tga 243
|||
Sbjct: 440 tga 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_a11.g1 MSMg01no121_a11.g1 CHROMAT_FILE:
MSMg01no121_a11.g1 PHD_FILE: MSMg01no121_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:40 2005
(244 letters)
>mm_chr4_85362410_85363053
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 caggtggcatcagaagtcttttatagagaaagttgaccatgacagtttaaggtcaaattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caggtggcatcagaagtcttttatagagaaagttgaccatgacagtttaaggtcaaatta 385
Query: 61 tcttaatttgccctcaaacaagacagaagaaagaactgccccttcttcagacctgtgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tcttaatttgccctcaaacaagacagaagaaagaactgccccttcttcatacctgtgggt 325
Query: 121 ttctgactcccagatgattccctgcatccttcactgctggctggctttgagatcgttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctgactcccagatgattccctgcatccttcactgctggctggctttgagatcgttccc 265
Query: 181 tgtgtgtgcaaaagttgttcctctcgaactcaagagtgggacgtttctcccacatagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgtgtgcaaaagttgttcctctcgaactcaagagtgggacgtttctcccacatagctt 205
Query: 241 tcac 244
||||
Sbjct: 204 tcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
