Query= MSMg01no121_i12.b1 MSMg01no121_i12.b1 CHROMAT_FILE:
MSMg01no121_i12.b1 PHD_FILE: MSMg01no121_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:20 2005
(522 letters)
>mm_chr4_23045324_23046245
Length = 922
Score = 803 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Minus
Query: 96 atcttcttaccatttcaacatccctccatcttatctttagtcccttgctttcctactttc 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atcttcttaccatttcaacatccctccatcttatctttagtcccttgctttcctactttc 663
Query: 156 tggactccagcttccaacaggggaagagtcttcccttctactagataccaaaaagactgg 215
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tggactccagcctccaacaggggaagagtcttcccttctactagataccaaaaagactgg 603
Query: 216 gagaaatccagttaggctgccagccaccaatctaccctatgctctcagctgctgtgcacc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagaaatccagttaggctgccagccaccaatctaccctatgctctcagctgctgtgcacc 543
Query: 276 ctattctcagattcttctcttcctaatgcctatatcccagacccaactgagacagggact 335
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 542 ctattctcagattcttctcttcctaatggctatatcccagacccaactgagacagggact 483
Query: 336 ccttgctgtaccagagactaagccaactaggaagagtttaaaagaggttggcaactgatc 395
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccttgctgtaccagagaccaagccaactaggaagagtttaaaagaggttggcaactgatc 423
Query: 396 aaaatctctcactaactcaatatcttggcatttcccccaccctaccaacagtcctcgggc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaatctctcactaactcaatatcttggcatttcccccaccctaccaacagtcctcgggc 363
Query: 456 ttcctaattttcttgatctagcctctaactggggcaaagtttccctaccctaccagaaaa 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcctaattttcttgatctagcctctaactggggcaaagtttccctaccctaccagaaaa 303
Query: 516 aacacaa 522
|||||||
Sbjct: 302 aacacaa 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no121_i12.g1 MSMg01no121_i12.g1 CHROMAT_FILE:
MSMg01no121_i12.g1 PHD_FILE: MSMg01no121_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:20 2005
(286 letters)
>mm_chr4_22888899_22889584
Length = 686
Score = 487 bits (252), Expect = e-142
Identities = 276/284 (97%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 atttttatttttgtcctttgagttcacgcctagatcatgaaaagatcctctttatttatt 60
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 202 atttttatttttgtcctttgagttcacgcctagatcatgaaaagat-ttatttatttatt 260
Query: 61 catttatttatttaccaattttgtcagtcttcactgagaatgagccctgtgttgtcttta 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catttatttacttaccaattttgtcagtcttcactgagaatgagccctgtgttgtcttta 320
Query: 121 ggaagtacagtcctcccagtggtgtgtgtgagccacctgagttaccacacacagatccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagtacagtcctcccagtggtgtgtgtgagccacctgagttaccacacacagatccgg 380
Query: 181 agggcgaagggccagcctgcaatgctggtacatggcagtcaatagatgggtagagagaac 240
||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||
Sbjct: 381 agggcgaagggccagcctgcagtgctggtacatggcagtcaatacatggatagacagaac 440
Query: 241 gcattcatacttctcgatagaggggtcagtgtcacctgaaagga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcattcatacttctcgatagaggggtcagtgtcacctgaaagga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
