Query= MSMg01no122_e10.b1 MSMg01no122_e10.b1 CHROMAT_FILE:
MSMg01no122_e10.b1 PHD_FILE: MSMg01no122_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:33 2005
(618 letters)
>mm_chr4_46578857_46579874
Length = 1018
Score = 1094 bits (566), Expect = 0.0
Identities = 601/618 (97%), Gaps = 9/618 (1%)
Strand = Plus / Minus
Query: 1 cagccaggctgaccctattatcagacctcgccttcaccatcacatctcctctcagacttg 60
|||||||||||||||||||||||||||||| |||| ||||||||||| |||
Sbjct: 750 cagccaggctgaccctattatcagacctcgggttca---------ctcctctcagatttg 700
Query: 61 gcgcttccagaaaaggggtgatctcagagagtggtaaggtgagagcagtgacccagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gcgcttccagaaaaggggtgatctcagagagtggtaaggtgagagcagtgacccagacat 640
Query: 121 tcattccttgctctccagccctgggcactacgtaagcccggagccagccctgggtaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcattccttgctctccagccctgggcactacgtaagcccggagccagccctgggtaggga 580
Query: 181 ctggtgattggatgaaatcatagtcacctctttacaaaccttctggaactttctgattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 579 ctggtgattggatgaaatcatagtcacctctttacaaaccttctggaactttctgcttta 520
Query: 241 gaatgttctagtctctggtttagggtgctgggctctcttgtttccatagctttctctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaatgttctagtctctggtttagggtgctgggctctcttgtttccatagctttctctttc 460
Query: 301 acaggcaagttgtcttagtcagggctctcagggacttacccatctcctgtggtagagcga 360
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acaggcaagttgtcaaagtcagggctctcagggacttacccatctcctgtggtagagcga 400
Query: 361 cgaacttgtccctgactacctggaatatcctcaggtttgggattttaggttcgtttttat 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 399 cgaacttgtccctgactacctggaatatcctcaggtttggggttttaggttcgtttttat 340
Query: 421 ttttcttgcagtcctagatattacacctagggacttgcacatgataggtaagtgtcctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttttcttgcagtcctagatattacacctagggacttgcacatgataggtaagtgtcctgc 280
Query: 481 cactaagctgtctcctcaaacccttcttgtctcctgagatgggaatctcactatgtagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cactaagctgtctcctcaaacccttcttgtctcctgagatgggaatctcactatgtagtc 220
Query: 541 caggctagtctcaaaattgtggcagtcgtacctgagccgtcccagtgttagaatccagat 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 caggctagcctcaaaattgtggcagtcgtacctgagccgtcccagtgttagaatccagat 160
Query: 601 gtcaagctgccacaccca 618
||||||||||||||||||
Sbjct: 159 gtcaagctgccacaccca 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_e10.g1 MSMg01no122_e10.g1 CHROMAT_FILE:
MSMg01no122_e10.g1 PHD_FILE: MSMg01no122_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:33 2005
(633 letters)
>mm_chr4_46433384_46434416
Length = 1033
Score = 1195 bits (618), Expect = 0.0
Identities = 630/634 (99%), Gaps = 2/634 (0%)
Strand = Plus / Plus
Query: 1 tgttaaattaaaatctcagccagggttgcct-acacatctgtctctggtctcgtgaggaa 59
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 201 tgttaaattaaaatctcagccagggttgc-tgacacatctgtctctggtctcgtgaggaa 259
Query: 60 acgcctttggctgtaaatcctggtcatagcaggtagaggaagctaagctagatcagataa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acgcctttggctgtaaatcctggtcatagcaggtagaggaagctaagctagatcagataa 319
Query: 120 cagccaagtgtggagaaggcagagaagggagactagggtggtaagtgggcggctaaaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagccaagtgtggagaaggcagagaagggagactagggtggtaagtgggcggctaaaaca 379
Query: 180 gaggatagtcttcactctttcataaaccaggcagatgcaatactttttggtctggaaatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaggatagtcttcactctttcataaaccaggcagatgcaatactttttggtctggaaatt 439
Query: 240 tccttagaactcatttctagtgtgagatgaactttgagagaaagtatatactaaacttat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccttagaactcatttctagtgtgagatgaactttgagagaaagtatatactaaacttat 499
Query: 300 gaaatgtattatcccttctacttaagaggttaggtttgtgtatccagagttcaaggcaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaatgtattatcccttctacttaagaggttaggtttgtgtatccagagttcaaggcaac 559
Query: 360 ctcaacaacattgtgagatgccatctcaaaataaatcaagacgtgatattccatgtcatc 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 ctcaacaacattgtgagatgccatctcaaaataaatcaagacatgatattccatgtcatc 619
Query: 420 taaccaaattttccaagagttaactaaagaccctctacaggcacagctcattttagaaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taaccaaattttccaagagttaactaaagaccctctacaggcacagctcattttagaaaa 679
Query: 480 ggttcttgtggggtggtggtggagcaagcctggatttgatctctcacattctttagccag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggttcttgtggggtggtggtggagcaagcctggatttgatctctcacattctttagccag 739
Query: 540 agacactcttactatatacaacaaccctctcttctgccttcaccaatttcctccacagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agacactcttactatatacaacaaccctctcttctgccttcaccaatttcctccacagag 799
Query: 600 ttagccacaaatgggttcctgtacttgggaggca 633
||||||||||| ||||||||||||||||||||||
Sbjct: 800 ttagccacaaacgggttcctgtacttgggaggca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
