| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-123C20.T7 (MSMg01no123_c20.b1) | MSMg01-123C20.TJ (MSMg01no123_c20.g1) |
|---|
| ACC | AG332852 | AG332853 |
|---|
| length | 1,253 | 1,263 |
|---|
length of high quality
(start - end) | 280 (127 - 406) | 383 (75 - 457) |
|---|
| definition | CHROMAT_FILE: MSMg01no123_c20.b1 PHD_FILE: MSMg01no123_c20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:32:32 2005 | CHROMAT_FILE: MSMg01no123_c20.g1 PHD_FILE: MSMg01no123_c20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:32:32 2005 |
|---|
| singlet/doublet | doublet | doublet |
|---|
| BLAST hit | unique | unique |
|---|
| Map location. | (97,428,631 - 97,428,910) | (97,540,908 - 97,541,286) |
|---|
| sequence | NAGGTTATTNNNNAAACACTGGGCGCTATAGACTCCTATAGGGAGAGGAT
CCGCGGAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCATCTCTGTCTCTCTCTGTCTATGTCTCTGTCTCTGTCTCTCTGCCTC
TCTCTCTCTCAACACTGGCCTCAAATATTTGATCTTTCTGGATTAGTATT
TAGGATTACAGGCAGCAGCACCACCCCTGGCTTTAACAGGAGACTATAAA
AGTAAGTAAAGAATAAGTTACAACGTTAGAATGAAACTACCTAAATTAAG
GAAAATTCCATTTAATGAATTACATATTTTTGCAATGTTTAATGTGTGTG
TGTGTCTGTGTGTGTCCGTGTGTGTATACAGGGATAAAGATAGAGGACAG
ATGGATATTTTAACTATAGACAGAACTCAGGGCCTTGTTTATGCCTGGAG
AGACATCTATTTTTTACCCACCCCAATATTTCATTTTTAATGTAACAAAA
AAATAGTAGTCTCCCATTAGAGTAGTTTATTCTAAATTGCTCTAGTATTA
ATGGTACTAAAATATTAGTTGATGAAGTAATGACTGAAAGGGCATATCTG
CTTTACCAACCAGTAGTAATCTAAAGGCATTACCTCACCACCAGCCAGGT
CAACCATTCATCAGAATAGTATTCACTTTAAGAGAAGAGGCAACTTTCCC
ACCACTGTGCAGAGACATCTTGTACTATGTATCATTTTTTAACCAAGCTG
TTTACTAAGTATCTTTTGCTTTCATATTAGCCTCTATTTACAGTGCTCAT
CTATCCTTCAAGCCTACGGTTTTGATCCCCAGAACCCCTTTAACCCCAAC
CTTTGTCTATAATCCCCATCGTCATGTATTTTTTGTTATTAAATATAAAA
TTATTTTCTTGACTCCCATTGACCACTTTAATTGTTTCATAACTATCCCT
GCAATTATTGTAAATCTTTGTTTTACTATTTTTTCATTTGTTTCTTATAA
TTTTTAACTTGTTAAATTTTTATATTGAATGTACCATTATTATCTGTCTA
CCTGTTTACACCAAACTCTTAATTTTTTCTCTCTTTATTCCTATCTTCTT
CCTATTTCTTCAATTAAACCTATTCTCTTTTCCTTCTATTTCCCTTGTCT
TTACACTTTTCTGTTCTTATCTCTCTTCTTTCTTTTCTCTTTATCTCTGC
TCTCTTCCTCATATAATCTTATTTGTATCTTTCTACTTCTTCTTCTCTTT
CCT
| NAATTTTTNNNNNCTTGATGGAGCCGTGGGCGCCXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTTATCCAAGCTTTAGGTATCTGTG
AGTGCCAGGTGAGCCTTAGACACTTGATGTCAGTGGTCTTCAATTCATAT
GTCTGGGTTCTGATACCTTACAGATTCTAATTCCAAAAAGCATATTCTCT
AAAATCGAGATGTTCAGTAGGCACACACTTCTTCAGTTCCGTCTAGAGAT
GTCCAAATGCTAGAGTTTACAACCTACCCTGAGACTACCACTCCCCTACT
CCTATACATTTAAAATTAGTCATTCTTTTAAGGCATCAATAAAATGGGGT
GAGATGTGTATGTGTGTCTATAAGCAAAGGACTGAGAAAGTAAAGACAAG
GTACTTCACATCCCAATTCACAGCAGCCTGGTTTGGGAAAAGACCTGGTC
TCCAAGCTTTTTTTACACCTCCCACAATAGCAGCAGTCATAAATAGTAAA
CATCTGGGGAATACCCAGTGTTCTAGTGCTAAGAATTCATTAGCTGAGGG
GCTGGGGTGATGGTTCGGCTTTTACGAGAACATATTGCTCTTCCAGAGGC
TGGAATTCAATTTTCTGCACATTTATCAGTAGTCATTTATATTTCCAGCT
CTAGAGGGATCCAACTTCTCTGGCCTCTGTGGGCAACTGAACTCATGTGC
ATATGTCTCTATATAAACACATACTTATATATAATAAATATATTTAAGTA
TATTAGATACCTATTTATACCATATATATATATTTGTACATATTTATATA
TAGTTACTTATGGTAAAAGATACTTTTTATTCTTTTAAAAGATTTATTTT
AAATTCTATTTCTAATGGAACTTGTTTTCGACTTTAACTACACTCTGTTT
CCCCCTGAAACTTGACCTCCTGGATTTCTCCTGGCCTGCTTCCTATCCCC
TTTGTCCGCTATATGTAGTACATATCTGTTTCTTCATCCTTTTGTTCCTC
TTTGCTCATTCATTTGTTTTTATCTTTCTTTCATTATTTTGTATTCTTTA
TCCTGTTCTTTTCTCTTCTCTTTTTATACCCTCCTCCCTTTCTATTTTTT
TCTTTCTTCTTCCTTCGGTCTATTACTCATTTCCTTTTTTCTCACTATTT
GTATTCTCTCTCCTACCCCCGACTTAACCATTTAACCTCTATCTTTTTCC
TTTTTTCTTCCTTTTCTCTCTTTATCCGTGTTCTTTTTGTCTTTCTCTTT
TCTACTTCTTAAC
|
|---|
| quality values | Open.Hide. 0 3 6 6 6 6 8 8 3 0 0 0 0 3 11 12 9 9 7 7 8 8 10 13 17 14 13 10 8 8 8 19 19 9 8 8 10 13 16 19 21 36 36 34 34 34 36 36 37 47
50 50 48 50 53 53 53 47 47 53 43 43 43 53 53 53 50 50 50 50 50 50 42 42 28 26 19 18 17 11 11 11 16 16 18 25 29 31 31 31 31 36 36 36 36 36 42 42 43 43
43 43 43 50 50 50 50 36 35 30 35 31 31 31 31 23 23 10 10 10 8 6 6 6 8 8 15 22 30 29 29 29 30 32 36 32 32 36 36 36 37 33 30 24 18 13 13 24 27 42
48 48 68 68 68 68 68 68 68 68 68 57 50 47 48 48 48 47 48 47 54 54 54 54 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 39 43 37 32 32 32 44 57 57 57 57
57 57 54 54 57 57 57 68 68 57 68 57 59 59 59 59 59 44 43 38 38 43 50 52 57 57 57 57 52 43 43 52 57 57 57 57 54 54 52 57 57 52 52 57 57 57 57 57 57 57
52 52 52 57 57 57 57 59 57 57 57 57 57 57 57 52 52 57 57 57 52 52 52 57 57 57 57 57 57 57 59 59 59 57 57 43 43 52 52 57 57 57 54 54 57 57 57 57 52 52
52 52 52 59 59 59 57 57 54 57 57 57 57 54 54 57 59 59 57 57 57 57 57 57 57 57 59 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 54 48 48 57 57 57 57 57
57 57 57 57 59 59 59 59 57 57 57 59 57 54 54 54 59 54 54 54 54 54 59 54 54 47 43 39 30 24 32 19 19 19 32 32 48 48 57 57 57 48 46 46 43 43 48 48 48 48
34 30 22 12 12 16 16 13 12 12 12 11 11 12 19 27 30 39 39 34 34 32 43 43 47 47 28 29 17 22 22 30 30 23 30 28 35 35 43 43 59 47 43 43 39 43 35 35 35 39
39 43 43 34 34 18 22 10 11 11 13 14 19 12 12 11 11 12 11 11 11 13 13 15 21 22 34 35 42 41 48 48 43 43 43 43 39 39 35 32 30 30 28 28 28 28 28 27 24 24
21 21 18 18 18 14 14 14 18 22 32 44 46 47 43 47 32 44 28 32 28 36 36 41 41 37 42 42 46 57 57 57 57 47 43 43 43 57 57 57 57 46 36 23 17 20 20 38 42 44
42 36 32 19 19 17 30 30 43 28 37 37 50 50 38 44 23 18 18 21 38 43 50 43 43 27 27 29 32 32 35 43 37 43 32 42 28 28 25 30 19 16 18 18 32 34 42 36 36 25
25 25 36 36 30 30 42 32 28 24 20 17 12 21 15 15 11 14 10 10 10 19 24 18 18 22 19 19 20 29 30 32 39 28 28 18 18 18 18 22 19 20 17 24 24 28 24 22 19 19
19 19 25 25 25 34 30 29 17 17 12 20 11 12 12 19 22 17 17 19 22 34 34 39 40 43 37 37 24 21 11 11 12 12 12 12 18 14 18 18 12 12 11 11 11 23 24 28 28 21
17 17 17 20 20 15 13 10 10 10 17 12 9 12 9 9 9 9 12 23 24 14 9 9 9 9 9 12 19 12 10 10 8 8 10 15 11 8 8 8 10 10 10 10 10 10 10 10 23 23
28 25 29 22 20 17 16 16 13 10 13 13 15 17 32 29 32 28 25 25 24 14 10 10 10 10 13 17 9 9 8 8 8 10 11 8 8 8 10 11 10 8 8 10 10 10 11 11 11 10
8 8 7 7 8 8 10 13 10 12 13 9 11 12 10 13 10 10 10 10 7 13 6 6 8 8 15 13 13 11 9 10 10 13 8 9 8 8 10 10 12 12 15 10 10 10 12 10 10 11
10 8 8 6 6 8 8 8 8 9 9 12 12 12 12 12 12 11 10 9 9 9 9 8 11 7 7 8 8 10 10 10 8 8 8 8 10 10 8 12 12 10 12 8 8 8 8 9 9 13
10 11 12 12 15 16 15 11 8 9 8 8 8 8 8 8 9 10 10 11 10 10 10 8 8 8 12 12 7 6 8 8 8 6 6 8 10 10 10 10 10 9 9 10 13 9 6 6 6 6
6 6 12 10 10 10 11 11 8 8 8 8 9 9 9 15 15 19 19 22 17 17 11 14 11 10 10 10 9 9 11 12 8 8 8 8 8 15 12 12 9 11 11 8 8 8 10 11 11 11
11 18 15 10 10 10 10 10 10 10 8 8 8 8 8 9 9 10 10 10 6 6 6 6 8 8 8 8 6 6 8 8 8 8 8 8 12 18 8 8 6 6 8 10 8 8 8 8 8 8
12 12 11 10 8 8 6 6 8 6 6 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 12 9 9 9 8 8 8 8 8 10 10 10 8 8 6 7 8 8 8 8 8 8 8 8
8 16 19 24 13 14 11 11 8 8 6 6 8 8 9 15 15 11 8 8 11 11 8 8 8 8 8 8 8 8 8 8 8 10 9 10 11 11 8 10 8 8 8 6 6 8 8 8 8 8
8 8 10 8 8 8 8 8 8 10 9 7 8 8 13 10 8 8 8 8 8 6 6 8 8 9 9 9 8 8 10 8 8 8 11 11 10 10 10 10 9 8 11 8 8 8 8 6 6 6
8 8 8 8 8 6 6 8 8 8 8 6 6 6 6 8 6 6 8 6 6 6 13 8 9 9 6 6 7 7 12 6 7 8 6 6 7 7 7 7 8 7 7 7 7 8 6 6 8 6
8 8 8 | Open.Hide. 0 3 10 10 8 8 8 3 0 0 0 0 0 3 7 7 8 8 8 8 8 8 7 7 6 6 6 6 6 8 8 10 8 8 9 8 8 8 10 10 13 8 8 10 22 19 19 12 12 19
24 28 32 32 33 37 29 26 24 29 29 47 47 47 47 47 53 50 50 48 27 23 12 10 11 11 11 10 10 13 21 24 31 36 42 48 42 42 42 42 36 36 40 47 47 40 37 37 37 35
35 35 35 35 35 36 41 31 31 28 28 20 20 12 10 9 9 11 11 13 22 30 33 33 33 33 33 33 33 38 36 36 36 37 37 42 50 50 50 48 44 42 33 24 27 19 19 19 29 32
44 57 68 57 54 54 54 54 48 48 57 54 54 54 53 68 68 68 68 68 68 68 68 68 68 50 50 50 51 51 68 57 57 57 57 57 43 44 43 44 57 57 57 68 68 68 68 68 57 57
57 57 57 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 59 59 59 59 57 54 54 57 59 59 57 57 57 57 57 57 57 57 68 68 68 57 57 68 68 68 68 68 68
68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57
57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 52 52 57 57 59 59 59 57 57 57 57 57 57 57 57 57 59 54 54 54 59 59 68 68 68 59 59 59 59 59 57
57 57 57 57 57 54 57 59 59 57 59 59 59 59 59 59 59 59 68 68 59 59 54 48 48 50 48 54 57 57 48 48 40 44 37 44 44 57 57 54 59 59 59 59 59 59 57 57 57 59
34 32 23 24 24 21 14 14 15 21 30 41 42 43 43 59 57 59 57 59 59 68 59 59 59 59 59 59 59 43 43 59 43 43 30 30 30 32 39 39 48 48 48 48 43 43 47 47 41 43
47 47 36 27 19 10 10 10 10 9 13 27 26 25 26 18 18 18 12 10 10 10 10 10 10 12 12 25 23 40 37 37 24 28 23 23 28 30 28 24 20 17 17 19 22 19 18 10 11 10
12 10 14 17 21 21 28 34 39 43 43 43 43 43 43 43 40 40 40 43 43 48 43 43 43 43 43 48 57 47 47 39 43 36 43 32 46 40 39 28 32 14 14 15 28 32 28 31 30 32
32 37 40 39 35 36 36 28 32 42 44 37 37 43 57 57 43 43 43 57 57 57 44 44 35 37 32 33 33 44 32 43 37 43 43 50 43 43 43 50 50 50 42 37 35 37 37 39 43 42
42 37 35 35 35 35 38 38 39 43 44 57 59 59 59 59 47 42 35 35 37 44 46 48 54 46 47 37 32 32 32 33 32 41 39 48 48 48 54 54 54 54 54 54 48 48 48 48 48 48
43 43 36 36 39 39 30 28 28 37 37 24 28 20 23 23 34 34 42 39 25 25 12 12 12 24 24 32 30 25 22 17 17 17 20 22 37 34 39 31 30 30 37 35 36 36 43 32 28 18
23 14 26 26 31 31 20 19 19 21 21 29 33 28 28 22 22 17 17 17 22 24 25 25 32 33 42 28 28 20 32 24 15 15 12 19 13 15 13 13 12 13 10 12 10 12 11 11 16 19
12 10 8 8 8 8 11 15 17 10 10 8 8 8 7 10 6 6 8 8 10 8 9 10 10 13 12 13 9 18 15 10 10 10 10 14 10 10 9 9 12 12 10 10 11 15 15 24 22 19
16 13 10 10 10 10 10 8 8 8 9 10 8 8 8 8 10 15 8 8 10 8 8 8 8 8 10 8 14 15 22 21 16 10 10 10 12 15 10 10 9 9 8 15 13 10 8 8 9 9
9 11 11 11 8 8 8 10 10 9 15 10 10 10 10 11 11 11 11 10 9 11 11 12 13 12 14 9 8 8 8 10 10 10 10 9 9 8 8 8 8 8 8 8 8 8 12 9 9 9
9 9 10 16 16 12 12 10 12 10 10 9 9 10 11 12 13 11 10 8 8 8 8 10 16 18 12 12 15 12 11 10 8 8 8 8 10 9 9 9 9 8 8 8 8 8 8 9 10 10
8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 6 6 8 6 6 10 8 8 8 8 8 8 8 10 12 10 9 8 8 8 10 8 9
8 8 8 8 8 8 6 7 11 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 6 6 8 10 9 9 9 9 9 9 10 10 8 8 6 6 10 8 10 19 32 23 21 12
11 11 11 11 12 8 8 8 8 8 8 9 10 10 10 13 16 11 11 11 11 11 10 10 9 9 9 10 15 8 8 8 8 8 8 8 8 9 15 15 10 10 9 10 10 11 13 10 12 8
8 6 6 10 8 12 8 11 7 9 11 10 14 14 9 9 9 9 8 8 8 8 8 10 10 8 8 8 8 8 8 8 10 10 8 8 8 8 8 9 8 11 10 6 6 8 6 8 8 8
8 8 8 8 12 8 8 8 9 9 10 10 13 11 11 11 10 9 9 6 6 6 6 8 6 6 8 8 8 8 8 8 11 10 8 8 8 8 8 8 6 11 9 7 12 12 10 9 9 10
10 10 13 12 12 9 7 10 8 8 7 7 10 7 10 10 10 10 10 6 6 8 8 8 8 10 8 8 6 6 8 11 7 9 10 10 12 8 8 6 7 6 6 10 13 9 9 9 13 19
17 13 9 9 10 10 13 10 10 10 10 10 10 |
|---|
