Query= MSMg01no125_p21.b1 MSMg01no125_p21.b1 CHROMAT_FILE:
MSMg01no125_p21.b1 PHD_FILE: MSMg01no125_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:12 2005
(201 letters)
>mm_chr4_33171871_33172471
Length = 601
Score = 373 bits (193), Expect = e-108
Identities = 199/201 (99%)
Strand = Plus / Plus
Query: 1 caagcattgccatttgggtaaagttggggtagaccctgacaaatgagagggtttacaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagcattgccatttgggtaaagttggggtagaccctgacaaatgagagggtttacaggg 260
Query: 61 caagccccagtggagaggaactggacagagcttagtgaatgtggcttagtccccaggttt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 caagccccagtggagaagaactggacagagcttagtgaatgtggcttagtccccaggctt 320
Query: 121 attccttcagaggtatccctgggtcactgtttttaattacacatcataagtggtccctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attccttcagaggtatccctgggtcactgtttttaattacacatcataagtggtccctca 380
Query: 181 cgaggcaccacattgtcagcc 201
|||||||||||||||||||||
Sbjct: 381 cgaggcaccacattgtcagcc 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no125_p21.g1 MSMg01no125_p21.g1 CHROMAT_FILE:
MSMg01no125_p21.g1 PHD_FILE: MSMg01no125_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:12 2005
(267 letters)
>mm_chr4_33345097_33345760
Length = 664
Score = 470 bits (243), Expect = e-137
Identities = 260/267 (97%), Gaps = 3/267 (1%)
Strand = Plus / Minus
Query: 1 cagccggaactacaggagctaggcatggtggcacacacctttaatcccaagaatgagggg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cagctggaactacaggagctaggcatggtggcacacacctttaatcccaagaatgagggg 564
Query: 61 agagacaggtgaatcttcatgaattgaagaccagccgagccaacatagcatgttccagga 120
|||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 563 agagacaggtaaatcttcatgaattgaagaccagctgagccaacatagcatgttgcagga 504
Query: 121 tagccaggcctgtatgagccaggtctcaaacatccaaaaccaaacgtaccactacccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagccaggcctgtatgagccaggtctcaaacatccaaaaccaaacgtaccactacccctc 444
Query: 181 aaaacgacagaaacaagacaaggggctggggagaagacctagtggtcaagagccctagct 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaa---acagaaacaagacaaggggctggggagaagacctagtggtcaagagccctagct 387
Query: 241 gctgttgctaaagacctgaattcagtt 267
|||||||||||||||||||||||||||
Sbjct: 386 gctgttgctaaagacctgaattcagtt 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 664
Length adjustment: 9
Effective length of query: 258
Effective length of database: 655
Effective search space: 168990
Effective search space used: 168990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
