Query= MSMg01no126_n18.b1 MSMg01no126_n18.b1 CHROMAT_FILE:
MSMg01no126_n18.b1 PHD_FILE: MSMg01no126_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:24 2005
(576 letters)
>mm_chr4_97544067_97545042
Length = 976
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Plus
Query: 5 gaattcagaaatgaagacacctcaggccccaccctagagacaaagacgatcctttctgca 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaaatgaagagacctcaggccccaccctagagacaaagacgatcctttctgca 264
Query: 65 gcaagcaggaagaagacagacctgagccagcgcccttccagctatcacatgatgatcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 gcaagcaggaagaagacagacctgagccagcgcccttccagctatcacatgctgatcact 324
Query: 125 tttcttcttaattaaaagtgccctattcctgacctctcactggcaggctactcagagctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcttcttaattaaaagtgccctattcctgacctctcactggcaggctactcagagctc 384
Query: 185 tgaatttctagagttctcaaagctattgaacaaatgcacaacattagtctagaccctcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaatttctagagttctcaaagctattgaacaaatgcacaacattagtctagaccctcca 444
Query: 245 actgtatagagtcccattcagtttcaaagatacctgggcaagtctagcctgagacccagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgtatagagtcccattcagtttcaaagatacctgggcaagtctagcctgagacccagc 504
Query: 305 acaaagccctgtgagtgtgttctttctcaggtcaaggttctttttctgtagcttcctggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaaagccctgtgagtgtgttctttctcaggtcaaggttctttttctgtagcttcctggt 564
Query: 365 gagtcaatgctgacccccctgcctcttgttgcgtgtttctccgactttacccaccacagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagtcaatgctgacccccctgcctcttgttgcgtgtttctccgactttacccaccacagt 624
Query: 425 tcaaatagtaataaccaggaatccatatgtaaagatttctaattaactcactgatgtgaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaaatagtaataaccaggaatccatatgtaaagatttctaattaactcactgatgtgaa 684
Query: 485 catgtgcagaaattccagacatttgtttacagctttttttttctattgtatttcatgggg 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catgtgcagaaattccagacatttgtttacagctttttttttctattgtatttcatggga 744
Query: 545 tgttgattttgttccattaaaaattccttt 574
||||||||||||||||||||||||||||||
Sbjct: 745 tgttgattttgttccattaaaaattccttt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_n18.g1 MSMg01no126_n18.g1 CHROMAT_FILE:
MSMg01no126_n18.g1 PHD_FILE: MSMg01no126_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:24 2005
(541 letters)
>mm_chr4_97659543_97660483
Length = 941
Score = 973 bits (503), Expect = 0.0
Identities = 528/541 (97%), Gaps = 8/541 (1%)
Strand = Plus / Minus
Query: 1 aaggactatatttattagcaaaaatctaaaaaatctaaaattcagagtagctttttaact 60
||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 930 aaggactatatttattagc--------aaaaaatctaaaattcagagtaactttttaact 879
Query: 61 tattggtatgtttgtgaatatttgacgcatgacatcatggatgaccctagaaacagaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tattggtatgtttgtgaatatttgacgcatgacatcatggatgaccctagaaacagaaga 819
Query: 121 aaacaccaaggccaagtggagtgaccaatactatgttttgacaaggatatttagattaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aaacaccaaggccaagtggagtgaccaatactatgttttgacaaggatatttagattaat 759
Query: 181 aaaagccaagtgcttttaaaacagtccattaagtatgtgtttcttctccttaaatttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 aaaagccaagtgcttttaaaacagtccattaagtatgtgtttcttctccttaaatttcaa 699
Query: 241 aacacctcaatgttgcccttttgtaaagacagaataaatctctgtcttccatcccgccac 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 698 aacacctcaatgttgcccttttgtaaagacagaataaatctctgtcttccatcctgccac 639
Query: 301 ccattccaggctgaaaacacttccatccattgtttgtttgcttctatgatagtaaattaa 360
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 638 ccattccaggctgaaaacacttccatccattgtttgtttgtttttatgatagtaaattaa 579
Query: 361 cttccctgtcttccctaaacatttagaccacaacataaatgagtgtttttcaagttaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 578 cttccctgtcttccctaaacatttagaccacaacataaatgagtgtttttcaagtgaaaa 519
Query: 421 cttgtttaagagcagagaaatattaacttttgggattatgttttcaaatatgccattgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cttgtttaagagcagagaaatattaacttttgggattatgttttcaaatatgccattgaa 459
Query: 481 atgtaaacaaatggagaacaattcacgtcaactaagtcaagccactatcattagcataga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgtaaacaaatggagaacaattcacgtcaactaagtcaagccactatcattagcataga 399
Query: 541 g 541
|
Sbjct: 398 g 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
