TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCACCTGATGCTACCAAATGTCTGAGAAACCCCTGAAAAAATGCTCAGCA
TCCTTAATCATCACGAAATGCAAATCAAAACAACCCTGAGATTCCATCTC
ACAACAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGTAGATGCTG
GCGAGGATGTGGAAAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
AGCTTGTGCAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAAAAAATTG
GACATAGTACTACTGGAGGATCCCGCAATACCTCTCTTGGGGATATATCC
AGAAGATATTCCAACTGGTAAGAAGGACACATGCTTCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGTTGGAAAGAACCCAAATGCCCCTCA
ACAGAGGAATGGTTACAGAAAATGTGGTACATTTACACAATGGAGTACTA
TTCAGCTATTAAAAAAATGAATTTATGAAATTCCTAGGCAAATGGATGGA
CCTGGAGGGCCTCATCTTGAGTGAGGTAACTCAATCACAAAAGAACTCAC
ATGATATGTACTCACTGATAAATGGATATTAGCTCAGAAATTTAGAATAC
CCAATATATAAGATACAAATTGTGAAACACATGAAGCTAGGGAAGAACAA
AGACCAAGGTGTGGATACTTTG

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTAGTGCCTCTGTGACATCAGACCATGTATTTTG
ATTAAAACATTTCTTTATTGAATTTTTTTATGGGCCCATTACTTGAGTCC
CTGGGTACATACAAATATTTTTTCTGGACAATGGAATTCAGCAATGAAGT
GGGACTGGGCCTGGAGTCATAAAATAGGAAATATTAAACTTAGTGGCTAA
GGAGTGCACAATGTCCTAAACATAAGCAGGCCAAGCTATCCCTGGGGCCA
GCTACTCTTTGAGTGAGATTAAATGCTTAGGGAACAATAAGAATAACTGA
ATAACTGAATACACATCTCATAATAGCCAGCTTTCCCACTTCTCTATCTC
TTTCACTCTTTCTCATTTTGTATTTATTTTTGTTTGATTGCTTGTTTGTG
ATTTATTTATTTATTTATGTTTGAGACTGTAGCATTGGCTGGCCTGGAAC
TTGCCCTGTAGAGCCTCAATTTGCATGTAATATGTGTCCTTTATCTCTCT
CTTACAAGTACTGGAATTATAACTGAGTACCATTGACACAGTATTGGTCT
GGGCCATAAACATTTACCATTGTTAGAGATTAGCCATATTCTTGATTTTG
TGAAAAATGTTGTCTAGGAAATGTCCTGATTTTGACAGAACTATGACAAG
TACTGCCTGTATTCCT

Query= MSMg01no128_k17.g1 MSMg01no128_k17.g1 CHROMAT_FILE:
MSMg01no128_k17.g1 PHD_FILE: MSMg01no128_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:51 2005
         (549 letters)



>mm_chr4_71089100_71090047
          Length = 948

 Score =  984 bits (509), Expect = 0.0
 Identities = 539/549 (98%), Gaps = 1/549 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtgcctctgtgacatcagaccatgtattttgattaaaacatttctttattgaattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 552 tagtgcctctgtgacatcagaccatgtattttgattaaaacatttctttattgaa-tttt 494

                                                                       
Query: 61  ttatgggcccattacttgagtccctgggtacatacaaatattttttctggacaatggaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttatgggcccattacttgagtccctgggtacatacaaatattttttctggacaatggaat 434

                                                                       
Query: 121 tcagcaatgaagtgggactgggcctggagtcataaaataggaaatattaaacttagtggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcagcaatgaagtgggactgggcctggagtcataaaataggaaatattaaacttagtggc 374

                                                                       
Query: 181 taaggagtgcacaatgtcctaaacataagcaggccaagctatccctggggccagctactc 240
           ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 373 taaggagtgcaaaatgtcctaaacacaatcaggccaagctatccctggggccagctactc 314

                                                                       
Query: 241 tttgagtgagattaaatgcttagggaacaataagaataactgaataactgaatacacatc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 313 tttgagtgagattaaatgcttagggaacaataagaataactgaataactgaatacacagc 254

                                                                       
Query: 301 tcataatagccagctttcccacttctctatctctttcactctttctcattttgtatttat 360
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 253 tcataatagccagctctcccacttctctatctctttcactctttctcattttgtttttat 194

                                                                       
Query: 361 ttttgtttgattgcttgtttgtgatttatttatttatttatgtttgagactgtagcattg 420
           ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttttgtttgattgtttgtttgagatttatttatttatttatgtttgagactgtagcattg 134

                                                                       
Query: 421 gctggcctggaacttgccctgtagagcctcaatttgcatgtaatatgtgtcctttatctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 133 gctggcctggaacttgccctgtagagcctcaatttgcatgtaatatgtgtcctctatctc 74

                                                                       
Query: 481 tctcttacaagtactggaattataactgagtaccattgacacagtattggtctgggccat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  tctcttacaagtactggaattataactgagtaccattgacacagtattggtctgggccat 14

                    
Query: 541 aaacattta 549
           |||||||||
Sbjct: 13  aaacattta 5


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space:   505582
Effective search space used:   505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)