CTCTTTCNNNNNNNNCCCCCCCCNNCCCCCNNNNCNTTCATAAXXXXXXX
XXXXXXXXXXXXXXXXXXXNATCGAAACGCGGATTCNTGTCTGGTTAGCC
AACACGGGGGTAGGACCAAATTANANAGTGTAACAGAGATATACTAGTGG
GAATCTGTCTGGATGAGCTAGATTACCTCCTCTGTACACACNCAAACACA
CACTTGCCATACTGCCACACNATACTACTGGCCCACAAAACCCCCCCTGC
CCTTCCAAATTTTCCCCCCCATAACTCCTTTATCCACTGGTCCCCCCCCC
CCACCCTTGCCCCATTGACCACCTCTTTATACCCCTCTTTTTTTCTCTTT
TTTCAAATTTAATATTAAATTTTTCTTTCCTCCCTTCAAAACACTTCCTT
TTTTTTAAANNAAAANGNCCCCAAAAATTTTTAAAAAGGAACTTTTCAAA
ATTTTTTTTTTTTTATTATTTTTTCCAAACAATTTTTTTTTTCAAAAATA
AAATTCTTCTACATTAANNNNTNNNGGGGGGGGGGGGGGGGGGTATTAAA
AGAANNNCACGNNNGCGNNNNNNNNNNNNNNNNCNGAACAATCCTGGACA
ATTAGTTCTTTTGGNNNNNNNNNTNTCNNNNNNNNNTNCCNNTTNNNCCT
TTCTCTCCTCCCTTCCGATTGAGGGGGGGGGCTCAGCCNCAACTA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTTATGAGTAATTATCAGCAAACAC
TTTATTTGTGTGCCTATTTTATATATCTGTATATTTGGGGTAGTATAAAA
ATTTCTCAGGCAAAAGGGGGTTCATGAATGGAAAATGATTAAGAAGATCT
CGTCTCAACAACGGAATGAATTTCCCACGCTTGCTGGGAAACCTTGCTGT
GTGGTAGAACTTACTTCCTGATTCATACACTTTGATGTATCTATCCCCTT
GGCCTCACAGAGTGGAAGGTTAAGTGAACTCTCTTAGGAGGTTTATACTC
AAGACACAAATGGCCAACATGAAGAGGACACTTCCTCATCCTACCACCTT
GGCAGATAAAGTCTCAACACGTGGATTCAAGAGAGGGAGTTGATACAACC
ATTCCAATCATGCACCAACATTGACTGTATGCATGTGGGCCTCTTTTCAA
TAATCTAGACCGCAAGTGAGGTGTAGTAATTGCACAAATTTATGGGTACG
ATGTAGGAAATCAACAAAGGAACACAATGTATAACAGTCAGTTCAAAGTA
ATTGGCATGTACGTACCATATATGTTGTTACTGTCCCCAGAAACTTTCAA
GGGTCCATGTAGACATTGGAATTTTAATATGGGGTGAGTGCAAATGTGAC
TTCTGACCC

Query= MSMg01no132_c03.g1 MSMg01no132_c03.g1 CHROMAT_FILE:
MSMg01no132_c03.g1 PHD_FILE: MSMg01no132_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:34 2005
         (635 letters)



>mm_chr4_55764411_55765445
          Length = 1035

 Score = 1050 bits (543), Expect = 0.0
 Identities = 573/587 (97%), Gaps = 7/587 (1%)
 Strand = Plus / Minus

                                                                        
Query: 56   tatatttggggtagtataaaaatttctcaggcaaaagggggttcatgaatggaaaatgat 115
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1034 tatatttggggtagtataaaaatttctcaggcaaaagggagttcatgaatggaaaatgat 975

                                                                        
Query: 116  taagaagatctcgtctcaacaacggaatgaatttcccacgcttgctgggaaaccttgctg 175
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 974  taagaagatctcgtctcaacaaccgagtgaatttcccacgcttgctgggaaaccttgctg 915

                                                                        
Query: 176  tgtggtagaacttacttcctgattcatacactttgatgtatctatccccttggcctcaca 235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  tgtggtagaacttacttcctgattcatacactttgatgtatctatccccttggcctcaca 855

                                                                        
Query: 236  gagtggaaggtt-------aagtgaactctcttaggaggtttatactcaagacacaaatg 288
            ||||||||||||       |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 854  gagtggaaggttaagtgaaaagtgaactctcttaggaggtttatactcaggacacaaatg 795

                                                                        
Query: 289  gccaacatgaagaggacacttcctcatcctaccaccttggcagataaagtctcaacacgt 348
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 794  gccaacatgaagaggacacttcctcatcctatcaccttggcagataaagtctcaacacgt 735

                                                                        
Query: 349  ggattcaagagagggagttgatacaaccattccaatcatgcaccaacattgactgtatgc 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734  ggattcaagagagggagttgatacaaccattccaatcatgcaccaacattgactgtatgc 675

                                                                        
Query: 409  atgtgggcctcttttcaataatctagaccgcaagtgaggtgtagtaattgcacaaattta 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674  atgtgggcctcttttcaataatctagaccgcaagtgaggtgtagtaattgcacaaattta 615

                                                                        
Query: 469  tgggtacgatgtaggaaatcaacaaaggaacacaatgtataacagtcagttcaaagtaat 528
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614  tgggtacggtgtaggaaatcaacaaaggaacacaatgtataacagtcagttcaaagtaat 555

                                                                        
Query: 529  tggcatgtacgtaccatatatgttgttactgtccccagaaactttcaagggtccatgtag 588
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554  tgggatgtacgtaccatatatgttgttactgtccccagaaactttcaagggtccatgtag 495

                                                           
Query: 589  acattggaattttaatatggggtgagtgcaaatgtgacttctgaccc 635
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494  acattggaattttaatatggggtgagtgcaaatgtgacttctgaccc 448


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)