ATTTGCGGCCGCAAACGAATCCNATATCGNGACCGCCGCGGAANNCANGG
TTATTCGNAAGCCGGAGNCNGACNGANAGGCNAANAAAANCAAAGGGANN
CGGGACAAGTGAACAAGAAACANGGANGGCACACCNGGCANAGCNNNCAG
CAAGAAGGNGGAAANNCACNNNANNNCCNNCAANAACAAAACCCGGCACC
CGAAACAAAACGCCGGACGCCCANGAAGCAGCGGAACACCCCTGTATAAA
CAACGCNAGAAGCCCANAACCGCCACCANGNGCAAGAAAACAAAAACGGG
ACCCCCCCAATTTTTTTTTTAGAGAAANAGGGAAAAAAGCAGCCGACAGG
GGGNCACCCCCCCGCCAAAACACAAACAAAAACAAAAACAAAAAAAAAAC
CCAAAAAAACAGGGCCAGAAACAAAGAGNNCGCAAANCAGCAAAACGCCG
CGCACCAGGACGGGACCCACCAACGNCACCAGCCANNCAGACAGNCAGGN
GACACNCCGAACACAGCCCCGCGCCCACCAGCCCGCCCAGACCCACCCCC
AAAAACCCCNCCGACAAGAACCACACACCCCGTCGCCGAGGAAGGACAGA
CCCNGCNCGGGGAACCACCCACCCCAGGGACCACAGGGCCCCAGCACGGA
AAAAACCCCAGCCCTCTTTTTTTTGTAGCCCTAAATAGGCCAGCGCGCTC
AAGGGC

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTCTTTTTTAAATTCAGGCCTCAGGATAGA
GGCTTGAAGTTTCTTAACACTTCTTGAGCCAGAAAGGAAGAATAAAAAAA
AGAAAAAGTAAAAGTAAAAGAAAACGAAAAAGAAAAAGAAAAAGAAAAAG
AAACAGAAACAGAAAAAGAAAAGAAGGCAGGAAGGAAGAAGGAAAGCAGG
AAGGCAGGAAGGCAGCAAGAAAGCAAGCAAGAATAAAGGAGAGAAAGAAC
CAAAGAAAGAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAAGAAAGGAAGG
AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA
GGAAGGAAGAAAGAAAGAAAAGAAAGAAAGTAATGCCAGCACACATAGAC
AACACACATACTGGATGAAGCTGAAGAAGGCTGTACCACCACTTTATTGT
TGTTCTTAGTTTTTATTCTTTCTCAGGATAATTGATCACATGGTTTTCTA
AGCATTTTTACATTTCATAAGTTCATAGGAATTTTATGACTATATTTCAT
GTCATAGGACAAGTAAGACTTAAGGAGTTACAGCAGAATTGTTTACACCT
TCTTTCCCTTAAGACTAGAAACTGACTGAACACTTATTATCTGTTA

Query= MSMg01no133_i05.g1 MSMg01no133_i05.g1 CHROMAT_FILE:
MSMg01no133_i05.g1 PHD_FILE: MSMg01no133_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:20 2005
         (534 letters)



>mm_chr4_36439459_36440392
          Length = 934

 Score =  617 bits (319), Expect = 0.0
 Identities = 370/411 (90%), Gaps = 38/411 (9%)
 Strand = Plus / Minus

                                                                       
Query: 125 aaaaagaaacagaaacagaaaaag-aaaagaaggcaggaaggaagaaggaaagcaggaag 183
           ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 934 aaaaagaaaaagaaaaagaaaaagaaaaagaaggcaggaaggaagaaggaaagcaggaag 875

                                                                       
Query: 184 gcaggaaggcagcaagaaagcaagcaagaataaaggagagaaagaaccaaagaaagaaag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gcaggaaggcagcaagaaagcaagcaagaataaaggagagaaagaaccaaagaaagaaag 815

                                                                       
Query: 244 aaagaaaaaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aaagaaaaaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaag 755

                                                                       
Query: 304 gaaggaaggaaggaaggaaggaaggaaggaaggaagaaagaaagaaaagaaagaaagtaa 363
           |||||||||||||                                     ||||||||||
Sbjct: 754 gaaggaaggaagg-------------------------------------aagaaagtaa 732

                                                                       
Query: 364 tgccagcacacatagacaacacacatactggatgaagctgaagaaggctgtaccaccact 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgccagcacacatagacaacacacatactggatgaagctgaagaaggctgtaccaccact 672

                                                                       
Query: 424 ttattgttgttcttagtttttattctttctcaggataattgatcacatggttttctaagc 483
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttattgttgctcttagtttttattctttctcaggataattgatcacatggttttctaagc 612

                                                              
Query: 484 atttttacatttcataagttcataggaattttatgactatatttcatgtca 534
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atttttacatttcataagttcataggaattttatgactatatttcatgtca 561


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)