Query= MSMg01no134_p04.b1 MSMg01no134_p04.b1 CHROMAT_FILE:
MSMg01no134_p04.b1 PHD_FILE: MSMg01no134_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:53 2005
(274 letters)
>mm_chr4_86189817_86190490
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 cttctcctaacagcaccatgagccaaagccaggtttgaagcactaaataggcatttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcctaacagcaccatgagccaaagccaggtttgaagcactaaataggcatttaaat 260
Query: 61 acatgcttcactgcactttagtaccaaataactcatttctaactgccctatttctccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatgcttcactgcactttagtaccaaataactcatttctaactgccctatttctccaaa 320
Query: 121 tcctatcaagctacttaatgaggcatctgagcccactctcacttcccactggggaggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctatcaagctacttaatgaggcatctgagcccactctcacttcccactggggaggcag 380
Query: 181 ggatggaagcgacacactgtcaaccaaacactgcaactgctgcgttagaaatgcagggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatggaagcgacacactgtcaaccaaacactgcaactgctgcgttagaaatgcagggca 440
Query: 241 gagatggttttaacataaccaacagaaggagatg 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 gagatggttttaacataaccaacagaaggagatg 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_p04.g1 MSMg01no134_p04.g1 CHROMAT_FILE:
MSMg01no134_p04.g1 PHD_FILE: MSMg01no134_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:53 2005
(710 letters)
>mm_chr4_86339605_86340714
Length = 1110
Score = 607 bits (314), Expect = e-178
Identities = 344/354 (97%), Gaps = 2/354 (0%)
Strand = Plus / Minus
Query: 358 tagcaagatacaagacatcctatgcaactcaatatccaaaacagccggcggttggggaga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 tagcaagatacaagacatcctatgcaactcaatatccaaaacagccggcggttggggaga 1051
Query: 418 agcagtgtgatggcttagtggagaaagatgtttgccacacaaccctgaagaacttagaaa 477
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 agcagtgacatggcttagtggagaaagatgtttgccacacaaccctgaagaacttagaaa 991
Query: 478 cccacataaaggtggagggagacagccaactccacaagttggcctcagacctccacgcat 537
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 990 cccacataaaggtggaaggagacagccaactccacaagttggcctcagacctccatgcat 931
Query: 538 gcgcagcggcacaggtgccagctcctcctgctagtaagagaacaaaaaagaaccatctac 597
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 930 gcgcagcggcacaggtgcccgctcctcctgctagtaagagaacaaaaaagaaccatctgc 871
Query: 598 acgtggaatggttgtgggaggatgctgatggg-agcgcgtgactgtggaggtcccaggcc 656
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 870 acgtggaatggttgtgggaggatgctgatgggca-cgcgtgactgtggaggtcccaggcc 812
Query: 657 gacgctggggttttctttgatcgttttcgtccttattccctgatccagggtatc 710
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 811 gacgctggggttttctttgatcgttttcgtccttattcattgatccagggtatc 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 710
Length of database: 1110
Length adjustment: 10
Effective length of query: 700
Effective length of database: 1100
Effective search space: 770000
Effective search space used: 770000
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
