Query= MSMg01no136_a14.b1 MSMg01no136_a14.b1 CHROMAT_FILE:
MSMg01no136_a14.b1 PHD_FILE: MSMg01no136_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:17 2005
(637 letters)
>mm_chr4_12571832_12572868
Length = 1037
Score = 1143 bits (591), Expect = 0.0
Identities = 624/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Minus
Query: 5 gaattcattatgtaaccctg-attataatcttctgaccctcctgcctcctcttctttcat 63
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 gaattcattatgtaaccatgaattataatcttctgaccctcctgcctcctcttctttcat 949
Query: 64 gctgagataacagactcaagcatcatgcatggtttatgtagtactaggaatcaacccagt 123
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 948 gctgagataacagactcaagcaccatgcatggtctatgtagtactaggaatcaacccagt 889
Query: 124 acctgctgcatgcctactaagcactctacataataatctaaaacctcagtcatgaaaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 acctgctgcatgcctactaagcactctacataataatctaaaacctcagtcatgaaaatg 829
Query: 184 agtaaaagcaatgttcacttaatagaaggtccttatctacttggtgttatatcacacaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 agtaaaagcaatgttcacttaatagaaggtccttatctacttggtgttatatcacacaga 769
Query: 244 gcatggtttcctcctaaagttaagcattttgtaaagtaagtcaatcataatggctcattt 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gcatggtttcctcctaaagttgagcattttgtaaagtaagtcaatcataatggctcattt 709
Query: 304 tcataatcataatgctggtctatggaagttgtctgtgtcatccatctaaatgaatctcat 363
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 708 tcataatcataatgctggtctatggaagttgtctctgtcatccatctaaatgaatctcat 649
Query: 364 taacataagcacttctcaacagaaggtgccatgttttagaagaaacgctggta-atcatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 648 taacataagcacttctcaacagaaggtgccatgttttagaagaaacgctgg-agatcatg 590
Query: 423 tgtccaatctggtctacattgcatgagtatcccataccatcgatggaaccaagagacatt 482
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 589 cgtccaacctggtctacattgcatgagtatcccatgccatcgatggaaccaagagacatt 530
Query: 483 aaatccaacctgctggcattctgtttggtcacttacattctcaaaaaagaaacaatcagt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaatccaacctgctggcattctgtttggtcacttacattctcaaaaaagaaacaatcagt 470
Query: 543 cttacaaatttaggacaaaacaaacaaacaaattgaaaccgaaagcaaataccacttaag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cttacaaatttaggacaaaacaaacaaacaaattgaaaccgaaagcaaataccacttaag 410
Query: 603 tagcaaaacaatgatgattgaatttcagaaaaggc 637
|||||||||||||||||||||||||||||||||||
Sbjct: 409 tagcaaaacaatgatgattgaatttcagaaaaggc 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_a14.g1 MSMg01no136_a14.g1 CHROMAT_FILE:
MSMg01no136_a14.g1 PHD_FILE: MSMg01no136_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:18 2005
(291 letters)
>mm_chr4_12468276_12468966
Length = 691
Score = 495 bits (256), Expect = e-144
Identities = 262/264 (99%)
Strand = Plus / Plus
Query: 1 tgcctgccactgcctcccaagtgctgggattaaaggctccaagcttccttaatttttttc 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctgctgctgcctcccaagtgctgggattaaaggctccaagcttccttaatttttttc 260
Query: 61 cctttcctaatatttattcagtctgaaccaaccaccttctttctcttgatgcagaacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttcctaatatttattcagtctgaaccaaccaccttctttctcttgatgcagaacctg 320
Query: 121 atgtcttcttaccatttcttgagcccactgtgcctgccagcaccttagaaccaagcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtcttcttaccatttcttgagcccactgtgcctgccagcaccttagaaccaagcagtt 380
Query: 181 ccaacagtgcgttgtttaccctcaatacagccctgtcaactcctgccctactgcctttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaacagtgcgttgtttaccctcaatacagccctgtcaactcctgccctactgcctttca 440
Query: 241 aagtgtgtgtgtgtgtgtgtgtgt 264
||||||||||||||||||||||||
Sbjct: 441 aagtgtgtgtgtgtgtgtgtgtgt 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
