NNAAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGC
GGAATTCAAAAGGCTCCCAAGCTGAAGCACCCAAGTGAGGAGGACTCCTC
ATTCCCACTTGGGAGTGAGAAGAAAGCAATCATGAGTGGGGATGGAGGGA
GGAACTTGGAAAGGAAAGTGGATGGGAAGAGGGAACCTGATCTGTAATTG
GGTGAGGGAAAAGGACCGAAGCCCTGAGGACCTGCAGAAAGAAAGAAAAC
AGGCAAACTCAGGAAATAGGAGTTTGGGGGAGGGGACCCCCTTCTCCCAG
AGTGCACCAGAGACCTGGGATATGATAAATTCCCAGGACTCACAGGGAGG
GACCTGTGAGGGAGAGGGAACTTATAGAACCCACTTCCAGCAGGAAGACA
GGACATCAAGTGAGGGATGGGGTTGCCATCCCACAGTTATACCTCTTACC
CATAATTGTTTCTGTCTGAAAGAATTACAGGGATCAAAATGGAGAGAAGC
CTAAGGAAAAGAATGTCCAGTGACAGACCCAAAGTGGGATCCAGGTCAAA
GGAAGGTCCCAAAGTCTGACACTATTACTGAGGCTATGAAATGCTCACAA
AATGGGATCTATCATGACTGTCCTCTGAAAAACCCAACAAGCAGATGAGA
GAGTCAGATGCAGATATTTGCAGCTCACTAACAGACAGAAGCAGCCGACC

NCCCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTATAAGTGAAGGGCTGCATCTC
ATGAGAACTATCTTCCATTTCTTGCGAAAGAATTTATATGCAGGCTGTCT
TTTTAACCCTAAATTGTAATTAATGAACCATGGGTTTTAACTGGTATTGA
TCAAGCTATTATTCTCTCCTTTGAGGCTACAGACTGAAACTGGAATCTAT
ATCTGTCTTTGGTAGATCTAAACAATATGCCTCAAATAAACTGGGTCAAT
AAATACTATCTGACTGGAAAGACATTCTACCCATCACTCAAAAGCTCCCA
AAGCTTTTGCATACTTGAGAACAAATTGATGATGCAATTCCTTTGCATAC
AAGACTTCCTACCACTGAAGAACAGGAATAAAAAACATAATCAGTTCCTG
GGTTGTGAGTGAGGTTTCTCCAAACTTATGGTGTGTAGGGATGAGAATAA
TTTTGAAATGACATTTGAGTCACAAACTTGTTCATGTTTCTGGAATTTAT
TTTTCATTACTTTGTATTTATTTATAAATGTATTCATTTCTTTTAGGTTT
CCCAGCTTTGTGGAATATAAGTTGGGAAATATTCATTAATGATCTGAATT
TCATATGAATAAATACTGTAACAATTTTATTTTCATCTTTAGTTTT

Query= MSMg01no137_a24.g1 MSMg01no137_a24.g1 CHROMAT_FILE:
MSMg01no137_a24.g1 PHD_FILE: MSMg01no137_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:38 2005
         (619 letters)



>mm_chr4_51155610_51156628
          Length = 1019

 Score = 1151 bits (595), Expect = 0.0
 Identities = 613/619 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttataagtgaagggctgcatctcatgagaactatcttccatttcttgcgaaagaatttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 692 ttataagtgaagggctgcatctcatgagaactatcttccatttcttgggaaagaatttat 633

                                                                       
Query: 61  atgcaggctgtctttttaaccctaaattgtaattaatgaaccatgggttttaactggtat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgcaggctgtctttttaaccctaaattgtaattaatgaaccatgggttttaactggtat 573

                                                                       
Query: 121 tgatcaagctattattctctcctttgaggctacagactgaaactggaatctatatctgtc 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgaccaagctattattctctcctttgaggctacagactgaaactggaatctatatctgtc 513

                                                                       
Query: 181 tttggtagatctaaacaatatgcctcaaataaactgggtcaataaatactatctgactgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttggtagatctaaacaatatgcctcaaataaactgggtcaataaatactatctgactgg 453

                                                                       
Query: 241 aaagacattctacccatcactcaaaagctcccaaagcttttgcatacttgagaacaaatt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 452 aaagacattctacccatcactcaaaagctcccaaagcttttgcatacttgagaagaaatt 393

                                                                       
Query: 301 gatgatgcaattcctttgcatacaagacttcctaccactgaagaacaggaataaaaaaca 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 392 gatgatgcaattcctttgcatacaagacttcctaacactgaagaacaggaataaaaaaca 333

                                                                       
Query: 361 taatcagttcctgggttgtgagtgaggtttctccaaacttatggtgtgtagggatgagaa 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 332 taatcagttcctgggttgtgagtgaggtttctccaaacttacggtgtgtagggatgagaa 273

                                                                       
Query: 421 taattttgaaatgacatttgagtcacaaacttgttcatgtttctggaatttatttttcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 272 taattttgaaatgacatttgagtcacaaacttgttcatgtttctggaatttatttttcag 213

                                                                       
Query: 481 tactttgtatttatttataaatgtattcatttcttttaggtttcccagctttgtggaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tactttgtatttatttataaatgtattcatttcttttaggtttcccagctttgtggaata 153

                                                                       
Query: 541 taagttgggaaatattcattaatgatctgaatttcatatgaataaatactgtaacaattt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 taagttgggaaatattcattaatgatctgaatttcatatgaataaatactgtaacaattt 93

                              
Query: 601 tattttcatctttagtttt 619
           |||||||||||||||||||
Sbjct: 92  tattttcatctttagtttt 74


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)