Query= MSMg01no137_d21.b1 MSMg01no137_d21.b1 CHROMAT_FILE:
MSMg01no137_d21.b1 PHD_FILE: MSMg01no137_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:52 2005
(621 letters)
>mm_chr4_54210413_54211433
Length = 1021
Score = 1075 bits (556), Expect = 0.0
Identities = 556/556 (100%)
Strand = Plus / Minus
Query: 66 ttctttgtttttctgaggctatcttctaaggaatatcgtcatataggattggagactagc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttctttgtttttctgaggctatcttctaaggaatatcgtcatataggattggagactagc 962
Query: 126 ctgctccattagggcctcatactaatgggactgcatctggccatgacttcactttcaaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctgctccattagggcctcatactaatgggactgcatctggccatgacttcactttcaaat 902
Query: 186 attgttgcgtcctaaggcactgtgagctagggcttcaaattattattctgttggggcggg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 attgttgcgtcctaaggcactgtgagctagggcttcaaattattattctgttggggcggg 842
Query: 246 agatacaatttaactcgtgaaaaagatgtaaggctataatcaaactgagtaatcatacta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agatacaatttaactcgtgaaaaagatgtaaggctataatcaaactgagtaatcatacta 782
Query: 306 ttgcacacaccctagcatcctcaaaagggcattccctcacacctcttagagtccttatgt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgcacacaccctagcatcctcaaaagggcattccctcacacctcttagagtccttatgt 722
Query: 366 gggtttcaattcacacagacacagtagtaactctgcagctcagtattggaaggcagggtg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggtttcaattcacacagacacagtagtaactctgcagctcagtattggaaggcagggtg 662
Query: 426 atgcaagcagctggaaaagcttggacctgggagtcagaagatcccaaagtgtgataatgt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgcaagcagctggaaaagcttggacctgggagtcagaagatcccaaagtgtgataatgt 602
Query: 486 gtgcggcattttatatatccagcatctgtagcctttcagttcactttaacagacctctaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgcggcattttatatatccagcatctgtagcctttcagttcactttaacagacctctaa 542
Query: 546 tttccgcaccctttggatatagataattaatagtatcttcctttgagtcctcaaaaatga 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttccgcaccctttggatatagataattaatagtatcttcctttgagtcctcaaaaatga 482
Query: 606 tgcattttatctaaga 621
||||||||||||||||
Sbjct: 481 tgcattttatctaaga 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_d21.g1 MSMg01no137_d21.g1 CHROMAT_FILE:
MSMg01no137_d21.g1 PHD_FILE: MSMg01no137_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:52 2005
(251 letters)
>mm_chr4_54068642_54069292
Length = 651
Score = 431 bits (223), Expect = e-125
Identities = 241/251 (96%), Gaps = 7/251 (2%)
Strand = Plus / Plus
Query: 1 tttcttgacaaatttgcatgaacaattaatcaatctgtgttctccaacctcctccaacct 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 208 tttcttgacaaatttgcatgaa-------tcaatctgtgttctccaacctcctccaacct 260
Query: 61 ggtgagatgctggtgtgtgaaagatgtgattcctgtatcacagttgagctggtggcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgagatgctggtgtgtgaaagatgtgattcctgtatcacagttgagctggtggcatag 320
Query: 121 aggaaaaaagcagctctagcattttgaggacaatgcaaggaaaaggtcggtccagggctg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aggaaaaaagcagctctagcgttttgaggacaatgcaaggaaaaggtcggtccagggttg 380
Query: 181 taaagccacacggcagaggttgcgcttgttttcctggcggtgggggtagggtggtgatgt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagccacacggcagaggttgcgcttgttttcctggcggtgggggtagggtggtgatgt 440
Query: 241 ctaggcttgag 251
|||||||||||
Sbjct: 441 ctaggcttgag 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
