Query= MSMg01no139_b15.b1 MSMg01no139_b15.b1 CHROMAT_FILE:
MSMg01no139_b15.b1 PHD_FILE: MSMg01no139_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:22 2005
(595 letters)
>mm_chr4_45328456_45329451
Length = 996
Score = 1056 bits (546), Expect = 0.0
Identities = 582/594 (97%), Gaps = 3/594 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcattgctgttcactgcagagaacactcaaagatactgaggcacagactgtaa 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggaattctcattgctggtaactgcagagaacactcaaagatactgaggcacagactgtaa 737
Query: 64 catggcctgaagtttaaccactgtgtgtgtatgtttttcaaattggagttaaaagttgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 catggcctgaagtttaaccactgtgtgtgtatgtttttcaaattggagttaaaagttgtt 677
Query: 124 gtaacttatactctgtctggttcaaacaggatatatttctttcatggctattataaaata 183
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 676 gtaacttatactctgtctggtccaaacaggatatatttctttcatggctattataaaa-a 618
Query: 184 acttcagtaattacaaatatttcacttcataattagtattttttatatatattcag-ttt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 617 acttcagtaattacaaatatttcacttcataattagtattttttatatatattcagtttt 558
Query: 243 tttttccttagatgtaatagtatgatgaagatttttaatccaaggctggctaaacatcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttttccttagatgtaatagtatgatgaagatttttaatccaaggctggctaaacatcat 498
Query: 303 ttaacagaattcccacaatcttaaaaacctacgagctcaggttttggataaagaggagtg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttaacagaattcccacaatcttaaaaacctacgagctcaggttttggataaagaggagtg 438
Query: 363 -ttagagttggaggaagattctgtgctatctacgttatggtaaaacctccacagggaaaa 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttagagttggaggaagattctgtgctatctacgttatggtaaaacctccacagggaaaa 378
Query: 422 gtgtaggctggcaggtggtaagagctgaggggttctcagttcagtctgacctctgagaat 481
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 377 gtgtaggctggcaggtggtaagagctgaggggttctcagttcagtcagacctctgagaat 318
Query: 482 gagttatggacccctgaagcctatgtggcccagtcccttaaagggcttccctgaggcctt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gagttatggacccctgaagcctatgtggcccagtcccttaaagggcttccctgaggcctt 258
Query: 542 gcctattttgcaataagagtaacatagaaggtggattagtatgcttctgtgtca 595
|||||| |||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 257 gcctatcctgcaataagagtaacacagaaggtggatcagtatgcttctctgtca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_b15.g1 MSMg01no139_b15.g1 CHROMAT_FILE:
MSMg01no139_b15.g1 PHD_FILE: MSMg01no139_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:23 2005
(337 letters)
>mm_chr4_45195625_45196362
Length = 738
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 agatgaagagaaaaa-aacagacctggaaggagatcgggatagtgatggctagtgaatat 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgaagagaaaaagaacagacctggaaggagatcgggatagtgatggctagtgaatat 260
Query: 60 ggtcagagggtacgatgatgtccttgatggcatctatgaagcctggcacactgaatacat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcagagggtacgatgatgtccttgatggcatctatgaagcctggcacactgaatacat 320
Query: 120 tctaataaaattaaggaaaagaattgctccacaagggtgaaaggaggaaaacagccttaa 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tctaataaaattaaggaaaagaattgttccacaagggtgaaaggaggaaaacagccttaa 380
Query: 180 ggcaaagagtgcctggcactgtgggacccaccagaacggcagatgtagggagaaacagtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaaagagtgcctggcactgtgggacccaccagaacggcagatgtagggagaaacagtg 440
Query: 240 cagcaggctgtcagggatgagcgtgcaggggggcatcccacgcagagcagagcctctgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcaggctgtcagggatgagcgtgcaggggggcatcccacgcagagcagagcctctgaa 500
Query: 300 gccaatgacggccctgtgtgaaacattatcgacccagg 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaatgacggccctgtgtgaaacattatcgacccagg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
