Query= MSMg01no143_b16.b1 MSMg01no143_b16.b1 CHROMAT_FILE:
MSMg01no143_b16.b1 PHD_FILE: MSMg01no143_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:34 2005
(597 letters)
>mm_chr4_41345479_41346474
Length = 996
Score = 1102 bits (570), Expect = 0.0
Identities = 584/589 (99%), Gaps = 1/589 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaactgggcctgagccttcataccctgacagagagctagtgtccaataaaaggt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaactggggctgagccttcataccctgacagagagctagtgtccaataaaaggt 263
Query: 64 gactgactggttcatgtaaaaaaacaaaaacaagaatactcttatatcagcatgaaatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gactgactggttcatgtaaaaaaacaaaaacaagaatactcttatatcagcatgaaatgt 323
Query: 124 aaactggggatgcgctcattagtatagcagttgcctagaatgagaaggctcaatccttag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaactggggatgcgctcattagtatagcagttgcctagaatgagaaggctcaatccttag 383
Query: 184 tccctgcccccagacccatcacagctaatatttgtgcggtgtttctacgtagtactttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccctgcccccagacccatcacagctaatatttgtgcggtgtttctacgtagtactttgt 443
Query: 244 tgttgctgaggtgggttgatgtgtgggtcaagcaatgctcctggattgctcttctgagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgttgctgaggtgggttgatgtgtgggtcaagcaatgctcctggattgctcttctgagta 503
Query: 304 gctgggctgacggacacacacgccatgctgagtgcccccacagtcccttagcagtcttac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctgggctgacggacacacacgccatgctgagtgcccccacagtcccttagcagtcttac 563
Query: 364 ggctancacaagagtaatcggtcacctcgtgtacactcttataaaatgggcagttaactt 423
||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 ggctataaaaagagtaatcggtcacctcgtgtacactcttataaa-tgggcagttaactt 622
Query: 424 atagttgtatccatagttattcatagttggatacaatatttatcttttaaaaactttccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atagttgtatccatagttattcatagttggatacaatatttatcttttaaaaactttccc 682
Query: 484 tatgtagaaacaatgtttcagaacagtcaggcagcatatcttgcttttaatatcttcctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tatgtagaaacaatgtttcagaacagtcaggcagcatatcttgcttttaatatcttcctg 742
Query: 544 ccatcttttctatcctcacatgtagataaactgttgtaggttttttttt 592
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccatcttttctatcctcacatgtagataaactgttgtaggttttttttt 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 996
Length adjustment: 10
Effective length of query: 587
Effective length of database: 986
Effective search space: 578782
Effective search space used: 578782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_b16.g1 MSMg01no143_b16.g1 CHROMAT_FILE:
MSMg01no143_b16.g1 PHD_FILE: MSMg01no143_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:34 2005
(226 letters)
>mm_chr4_41503754_41504379
Length = 626
Score = 398 bits (206), Expect = e-115
Identities = 221/226 (97%)
Strand = Plus / Minus
Query: 1 attcattattcaaagaaacattttgaacatctgctgtatgcaagacactacaccagaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 attcattattcaaagaaacattttgaacatctgctgtatgcaagacactacaccagaagt 459
Query: 61 agggaatagaataatcaagaaagcaaacacggcaagccagtgggagaaacagatcctaaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agggaatagaataatcaggaaagcaaacacggcaagccagtgggagaaacagatcctaaa 399
Query: 121 taaatgaagcacacaaccaaaatcacagcaataggctggggcaagtggtagaaacccagg 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 398 caaatgaagcacacaaccaaaatcacagcgataggctggggcaagtggtagaaacccagg 339
Query: 181 aaatgctggtatggatgagagcatagggtggggtgtcagggagggt 226
|||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 338 aaatgctggtatggatgagagcgtagggtggggcgtcagggagggt 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
