TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATACCGCGG
AATTCCACTTGCTCTTCCTATCGGCACCATATGCTATATTGACCAAATGC
TTCATGCTCCAGCCACTTGGGCTTCACAGCACAAATGAACCAAACTCTAT
ATATGTAAAGCCAAACTGTTCTCTTAAAATAAAACACACAGGAAATAGAA
CCAAATACTTTTAAAGCAAGACTTAACTGATTTATAGTTGAAATAGTATG
GATATTCATGTCTGCCAGTCTTCACAAGCATGTTATCTTCCTTACATGGC
CACCCCACCCCCAACGCCCGCCCCAATCTCCAATAGCCCTTGCTAGCCTA
GAACTTGCTCAATGTATGCTCCTTAGACCATGTTGGCCTCAGACTTAGCA
TCCACCCTCCTGCCTCTGCCCCCGCAATGCTGACATTACAGGTGCGTCCC
CCTCCCATCCCTGTTTTTTCTTTTTTAGAGAGTGGTCAGATGGACAGACC
AAGTAATTATTACTTTTTTTTTTTTTTTTTTTTTTTGGNTGTTGTTAGTT
TGTTTTTTGAGNTTGTNTTTTATGTTNTGTTTTTTNTTTTNNTTTNTTTT
TTTTTTGTTCCGTTTTTTTGANNTTTTNTTTTATGTCTTGTTTTTTTGTG
TTCTGCTTACCTTTCCTCTTTCCCCTCTTTCTTCATTTAACTCTTTCTCA
CTCCTTCTCTTTCCAATCATTCTCTTTCTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATTGGAATAAAGTCAGAATTTACTATCT
AGAAAATATGAACAACTTAAGCAAAACAAGACTGCCTAATCAATAAAGAG
ACTAATAAAATAGGTGGTTCTCAAAAGATGAAATATAAATATCTAATAAA
CAAATGAAAAGCATTCAGCATCTTTGACCATCAAAGAACTGCAACACACA
CATACATACAGACAAACACTAAGATCATCTTACCCAGGTCAGAGAAGATA
ACTACCATTAGGAAAAAAAAAACTATAAATGTTAGTGATAATTGAAGTAC
AGAGGAAGTAGAGACTATACTCTGCTAGTAAGGATATAAATAAATCCATC
CACTATAAAAATCATCCCACGCGTTCTTCTGAGAAACTTAAATAATAATA
GAACTACTATAAGACTCAGCTATACCACTCCTGAGTACTTACCTGAAGGA
CTCTATATCAACATACCATACAAATATTTGCACATCTATGTTTACTGCAA
CATTATTCACAATAGATAACCTGTAGAACCATCCTAGGTGCCTAACAAAT
GAATGAATAAAGAAAATGTAATATATATACTCAATAGAATTATATTCAGC
CATAGAGAAATAAAATTTCTGGAAATCATCATATTAAGTGAAATAAGTAA
GATGTAAGACTCAGACAAAAACCACACACTTTC

Query= MSMg01no144_d15.b1 MSMg01no144_d15.b1 CHROMAT_FILE:
MSMg01no144_d15.b1 PHD_FILE: MSMg01no144_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:00 2005
         (466 letters)



>mm_chr4_94221772_94222637
          Length = 866

 Score =  826 bits (427), Expect = 0.0
 Identities = 448/455 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcaccatatgctatattgaccaaatgcttcatgctccagccacttgggcttcacagcaca 60
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 460 gcaccatatgctgtattgaccaaatgcttcatgctcgagccacttgggcttcacagcaca 401

                                                                       
Query: 61  aatgaaccaaactctatatatgtaaagccaaactgttctcttaaaataaaacacacagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aatgaaccaaactctatatatgtaaagccaaactgttctcttaaaataaaacacacagga 341

                                                                       
Query: 121 aatagaaccaaatacttttaaagcaagacttaactgatttatagttgaaatagtatggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatagaaccaaatacttttaaagcaagacttaactgatttatagttgaaatagtatggat 281

                                                                       
Query: 181 attcatgtctgccagtcttcacaagcatgttatcttccttacatggccaccccaccccca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 attcatgtctgccagtcttcacaagcatgttatcttccttacatggccaccccaccccca 221

                                                                       
Query: 241 acgcccgccccaatctccaatagcccttgctagcctagaacttgctcaatgtatgctcct 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 220 acgcccgccccaatctccaatagcccttgctagcctggaacttgctcaatgtatgctcct 161

                                                                       
Query: 301 tagaccatgttggcctcagacttagcatccaccctcctgcctctgcccccgcaatgctga 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||
Sbjct: 160 tagaccatgttggcctcagacttagcatccaccctcctgcctctggccttggaatgctga 101

                                                                       
Query: 361 cattacaggtgcgtccccctcccatccctgttttttcttttttagagagtggtcagatgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cattacaggtgcgtccccctcccatccctgttttttcttttttagagagtggtcagatgg 41

                                              
Query: 421 acagaccaagtaattattacttttttttttttttt 455
           |||||||||||||||||||||||||||||||||||
Sbjct: 40  acagaccaagtaattattacttttttttttttttt 6


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)