Query= MSMg01no151_e20.b1 MSMg01no151_e20.b1 CHROMAT_FILE:
MSMg01no151_e20.b1 PHD_FILE: MSMg01no151_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:04 2005
(366 letters)
>mm_chr4_99216968_99217733
Length = 766
Score = 640 bits (331), Expect = 0.0
Identities = 355/363 (97%)
Strand = Plus / Minus
Query: 4 ggaattcacggtgcattcataggatggctgctggcacctctagctactgccctggctgct 63
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 566 ggaattcacggtgcgttcataggatggctgctggcacctctagctcctgccctggctgct 507
Query: 64 tgtcacgcaggagtggaagtccactatcttacacataggaagacgagtgttctactatga 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgtcacgcaggagtagaagtccactatcttacacataggaagacgagtgttctactatga 447
Query: 124 attacacttccagccccaaacaatgatatcctagttaattcttacagttaataaaagtaa 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 attacacctccagccccaaacaatgatatcctagttaattcttacagttaataaaagtaa 387
Query: 184 agggtaaattataagacaaccattatacatggttttggggtaaagtaattttaacctgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agggtaaattataagacaaccattatacatggttttggggtaaagtaattttaacctgat 327
Query: 244 tgttagcattcaaacattgacagaattcccaatctggtctccagattgttttgaagaatc 303
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 tgtcagcattcaaacattgacagaattcccaatctggcctccagattgttttgaagaatc 267
Query: 304 agagctagaaatagtggacttccactccagcactttgtacaaagcttccttcaacaatgg 363
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 266 agagctagaaatagtggacttccattccagtactttgtacaaagcttccttcaacaatgg 207
Query: 364 act 366
|||
Sbjct: 206 act 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_e20.g1 MSMg01no151_e20.g1 CHROMAT_FILE:
MSMg01no151_e20.g1 PHD_FILE: MSMg01no151_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:04 2005
(222 letters)
>mm_chr4_99152844_99153466
Length = 623
Score = 391 bits (202), Expect = e-113
Identities = 214/218 (98%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 1 tgactagtaaaggtagatt-caacaatgccattaaaaagaccggaagagaatcgggctga 59
|||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgactagtaaagatggatttcaacaatgccattaaaaagaccggaagagaatcgggctga 260
Query: 60 cctttaaagcagatcacttcaaactatcatgggaagcgcctagcccaatatatagtatgg 119
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttaaagcagatcatttcaaactatcatgggaagcgcctagcccaatatatagtatgg 320
Query: 120 agcgtgggaaacatcctagaatcagagagccaggttcaagactaacactctgatccctat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcgtgggaaacatcctagaatcagagagccaggttcaagactaacactctgatccctat 380
Query: 180 aagtcaggagtcccaacaggaatcgcttagtctgagga 217
||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtcaggagtcccaacaggaatcgcttagtctgagga 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 623
Length adjustment: 9
Effective length of query: 213
Effective length of database: 614
Effective search space: 130782
Effective search space used: 130782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
