Query= MSMg01no151_j06.b1 MSMg01no151_j06.b1 CHROMAT_FILE:
MSMg01no151_j06.b1 PHD_FILE: MSMg01no151_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(371 letters)
>mm_chr4_151730598_151731368
Length = 771
Score = 667 bits (345), Expect = 0.0
Identities = 360/365 (98%)
Strand = Plus / Plus
Query: 5 gaattcagcgccaataccccgtttaagggtagctcggcagcagcagctgcggcggccgtg 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcgccaacaacccgtttaagggtagctcggcagcagcagctgcggcggccgtg 264
Query: 65 gccgcggccgtggagacagtgaccattgctcctcccttggccatcagtccccagcaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccgcggccgtggagacagtgaccattgctcctcccttggccatcagtccccagcaagtg 324
Query: 125 ccccagactctgcccatacgaaaggccaagaccaaagagggcaagggtaaggctatgggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccccagactctgcccatacgaaaggccaagaccaaagagggcaagggtaaggctatgggt 384
Query: 185 gactgggcaccggccctgtctggcagttctgccctctagatcctacagggctgttagggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gactgggcaccggccctgtctggcagttctgccctctagatcctacagggctgttagggg 444
Query: 245 gcatctgtactgaggactcagtgttgtaactggcctcgggctgacttctttgggagttaa 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 gcatctgtactgaggactcagtgttgtaactggcttcgggctgacttctttgggagttaa 504
Query: 305 catctgacccactaccaaaacactgtgggcatggaggtagggaggggtcatccacagcat 364
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catctgacccactaccccaacactgtgggcatggaggtagggaggggtcatccacagcat 564
Query: 365 ggggt 369
|||||
Sbjct: 565 ggggt 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_j06.g1 MSMg01no151_j06.g1 CHROMAT_FILE:
MSMg01no151_j06.g1 PHD_FILE: MSMg01no151_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(333 letters)
>mm_chr4_151870507_151871239
Length = 733
Score = 584 bits (302), Expect = e-171
Identities = 328/344 (95%), Gaps = 13/344 (3%)
Strand = Plus / Minus
Query: 1 caaacccacaggacagcagctgcagggtgccgtccctcttcctgccttcggtgaccactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caaacccacaggacagcagctgcagggtgccgtccctcttcctgccttcggtgaccactt 304
Query: 61 ctaccacagccacgacgctggggtggctcaaggtcgtgtggaagtacaagggctgtgaca 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctaccacagccacgatgctggggtggctcaaggtcgtgtggaagtacaagggctgtgaca 244
Query: 121 gagagcagaggccactgcatttgtgagagtgaggggtgcagag------------acaga 168
|||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 243 gagagcagaggccactgcatttgtgagagtgaggggcgcagaggggccctcctccacaga 184
Query: 169 acctgtcatgggcacacctcgagcatcaggccccacccagtgcccttgtgagggacgaga 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acctgtcatgggcacacctcgagcatcaggccccacccagtgcccttgtgagggacgaga 124
Query: 229 gcacaccaccgtgacaaacccttcacgggctgggtgcaggctcaggagctggagttcata 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcacaccaccgtgacaaacccttcacgggctgggtgcaggctcaggagctggagttcata 64
Query: 289 cccccagaaacccatgcaaatgccagggagggcatgacaggctg 332
|||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 63 cccc-agaaacccacgcaaatgccagggagggcatgacaggctg 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
