Query= MSMg01no151_n07.b1 MSMg01no151_n07.b1 CHROMAT_FILE:
MSMg01no151_n07.b1 PHD_FILE: MSMg01no151_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:45 2005
(667 letters)
>mm_chr4_72753490_72754556
Length = 1067
Score = 1230 bits (636), Expect = 0.0
Identities = 657/664 (98%), Gaps = 2/664 (0%)
Strand = Plus / Plus
Query: 5 gaattccaattgagcaaaatgtctctatctgtatcagtccccgcctcccggttcctgcct 64
|||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattccaattgagaaaaatgtctccatctgtatcagtccctgcctcccggttcctgcct 264
Query: 65 tgagttctggccatggtaataattaaggtgtaagaactaatagacatttcctctccaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgagttctggccatggtaataattaaggtgtaagaactaatagacatttcctctccaatt 324
Query: 125 agtttttggacagtgtttcatcataaacatcagaaatcaaactgacacatatacaatatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtttttggacagtgtttcatcataaacatcagaaatcaaactgacacatatacaatatc 384
Query: 185 tgattccaatctctggcaattca-acaaaattccaaagctatggaagttagtgtatgggg 243
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 385 tgattccaatctctggcaattcaga-aaaattccaaagctatggaagttagtgtatgggg 443
Query: 244 agttttcaaaagtaataataataattcactccttcaagtaaattataacttcctctttgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agttttcaaaagtaataataataattcactccttcaagtaaattataacttcctctttgt 503
Query: 304 tcatttttgtctctttcttccttcagggttttttcagatcgagtttctggtttatttgtt 363
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 504 tcatttttgtctctttcttccttcagggtttgttcagatcaagtttctggtttatttgtt 563
Query: 364 tgttttgtattacttagttattttaaagatctaatatgtatgttgccaagtttccattat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgttttgtattacttagttattttaaagatctaatatgtatgttgccaagtttccattat 623
Query: 424 ccagccatttatacacattaagggatagattcgatttatattctgaagtagttatctagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccagccatttatacacattaagggatagattcgatttatattctgaagtagttatctagc 683
Query: 484 ttctactagaaagttatgtcaatgaaaacaaggcactgattcttgcaactataaaacaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttctactagaaagttatgtcaatgaaaacaaggcactgattcttgcaactataaaacaaa 743
Query: 544 ttttaagaagtaaaaaaaggtacaatagatatttgagatataaattacctaatttacctg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttttaagaagtaaaaaaaggtacaatagatatttgagatataaattacctaatttacctg 803
Query: 604 tgatgtttgccatcatagaaataaaatgctcaaatggaaagaatgcactcaaattaaaga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgatgtttgccatcatagaaataaaatgctcaaatggaaagaatgcactcaaattaaaga 863
Query: 664 taag 667
||||
Sbjct: 864 taag 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_n07.g1 MSMg01no151_n07.g1 CHROMAT_FILE:
MSMg01no151_n07.g1 PHD_FILE: MSMg01no151_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:45 2005
(265 letters)
>mm_chr4_72819253_72819915
Length = 663
Score = 462 bits (239), Expect = e-135
Identities = 258/265 (97%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 tttttaatcctaatggaaaatttaaaatacaagcagatgtgggaaacactaattcctgtg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 463 tttttaatcctaatggaaaatttaaaatacaagcagatgtggaaaacactaattcctgtg 404
Query: 61 taccataaccaagatttagtaattattataatgtctgacacccttttccatctctgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 403 taccataaccaagatttagtaattattataatgtctgacacccttttccatctatgtctc 344
Query: 121 tcctctgatttctccatattacttaaagagaatctaaaagtgcgattcttgtcttagtag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 343 tcctctgatttctccatattacttaaagagaatctaaaagtgcgattcttgtctcagtag 284
Query: 181 tgtggcattatctgttaaacacaaactttcattaggcatattcacaaatacaatccttca 240
| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 283 tatggtattatctgttaaaca--aactttcattaggcatattcacaaatacaatccttca 226
Query: 241 accattacagtcacagttaaaattt 265
|||||||||||||||||||||||||
Sbjct: 225 accattacagtcacagttaaaattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 663
Length adjustment: 9
Effective length of query: 256
Effective length of database: 654
Effective search space: 167424
Effective search space used: 167424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
