Query= MSMg01no157_c16.b1 MSMg01no157_c16.b1 CHROMAT_FILE:
MSMg01no157_c16.b1 PHD_FILE: MSMg01no157_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:28 2005
(307 letters)
>mm_chr4_127172400_127173105
Length = 706
Score = 540 bits (279), Expect = e-158
Identities = 300/307 (97%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 1 agactcttctcccacagctgcagggatgctcagcctcctttactcttcgtcctataagga 60
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 agactct-ctcccacagctgcagggatgctcagcctcctttactctttgtcctataagga 259
Query: 61 tctggtgagcgccacagcttcctttgattagccgagtcagagatagccatctcctgcctg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 tctggtgagcgccacagcttccttcgattagccgagtcagagatagccatctcctgcctg 319
Query: 121 gtagctctctttagccctgagaagaatctctgcctgggacctcagcacttccagttgtat 180
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 gtagctctctttaaccctgagaagaatctctgcctgggacctcagcacttccagttatat 379
Query: 181 gtcttcacaggtatttctaaataagctcatttgatgctaaactagtgcccttcctcaacg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 gtcttcacaggtatttctaaataagctcatttgatgctaaactagtgtccttcctcaacg 439
Query: 241 gtccactccaaatccaagtctactctaccatgttttttaacgccgtcggtatttgcccga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 gtccactccaaatccaagtctactctaccatgttttttaacgccgtcggtatttgcccaa 499
Query: 301 tcgctca 307
|||||||
Sbjct: 500 tcgctca 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 706
Length adjustment: 9
Effective length of query: 298
Effective length of database: 697
Effective search space: 207706
Effective search space used: 207706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_c16.g1 MSMg01no157_c16.g1 CHROMAT_FILE:
MSMg01no157_c16.g1 PHD_FILE: MSMg01no157_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:28 2005
(290 letters)
>mm_chr4_127345512_127346196
Length = 685
Score = 511 bits (264), Expect = e-149
Identities = 282/290 (97%), Gaps = 5/290 (1%)
Strand = Plus / Minus
Query: 1 tagaccaagaacaagaggcagctgaagaagactccgctcctggctggaatgtcagaggtt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 485 tagaccaagaacaagaggcagctgaagaagactccactcctggctggaatgtcagaggtt 426
Query: 61 tcctctggttagagggagagcagaagtatctttgagcctcctgtgctctagaactttcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcctctggttagagggagagcagaagtatctttgagcctcctgtgctctagaactttcc- 367
Query: 121 gttttttcttttttttcttcaatcatcaggaaggccctgccttccctgttgctggcagag 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ---tttt-ttttttttcttcaatcatcaggaaggccctgccttccctgttgctggcagag 311
Query: 181 acattttgcctccaccttttataaagacagtgccttcagcgacaggaagagtgacagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acattttgcctccaccttttataaagacagtgccttcagcgacaggaagagtgacagttg 251
Query: 241 ctgctgagctgctcctctgccatcctgcacacctgctctgttttgctctg 290
||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 250 ctgctgagccgctcctctgccgtcctgcacacctgctctgttttgctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 685
Length adjustment: 9
Effective length of query: 281
Effective length of database: 676
Effective search space: 189956
Effective search space used: 189956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
