Query= MSMg01no157_l07.b1 MSMg01no157_l07.b1 CHROMAT_FILE:
MSMg01no157_l07.b1 PHD_FILE: MSMg01no157_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:06 2005
(632 letters)
>mm_chr4_108755549_108756579
Length = 1031
Score = 1156 bits (598), Expect = 0.0
Identities = 624/634 (98%), Gaps = 4/634 (0%)
Strand = Plus / Plus
Query: 1 actcatcttcactgctagagtaagagaactctgggactgtatttggagacaagctcgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 actcatcttcactgctagagtaagagaactctgggactgtatttggagacaagtt-gaca 259
Query: 61 tggctgggaggagtcagactgctgctaggtggtgagttcccactgcctacgagtcaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggctgggaggagtcagactgctgctaggtggtgagttcccactgcctacgagtcaaagg 319
Query: 121 ttttcaattagggaaaacggtggtagttaaggagatgggcccacaacagacctctctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttttcaattagggaaaacggtggtagttaaggagatgggcccacaacagacctctctaaa 379
Query: 181 gtcaagaccgagtttggtcaactgatgtaattctcaccttattttttaaccaacggttaa 240
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 gtcaagaccaagtttggtcaactgatgtaattctcaccttattttttgaccaacggttaa 439
Query: 241 atcagacaatgaaaacaacaaaggcaactgtgatacagactggggacacagccttttttc 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcagacaatgaaaacaacaagggcaactgtgatacagactggggacacagccttttttc 499
Query: 301 tttattcattttatagtactgaacactgattccagggattcacacatactaaaaaaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttattcattttatagtactgaacactgattccagggattcacacatactaaaaaaacat 559
Query: 361 cctcccactgagcagtaacacccacagcctggatataaccttttaaacaaatgggaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctcccactgagcagtaacacccacagcctggatataaccttttaaacaaatgggaaaaa 619
Query: 421 ttctgtatctccacactgtgacttaagattaacttgtgttctgtagtagtaaggagtcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttctgtatctccacactgtgacttaagattaacttgtgttctgtagtagtaaggagtcct 679
Query: 481 ---gattgcacacacgctggtgtttggcatcccacaagagagagcagtaccaatgggagc 537
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 680 tctgattgcacacacgctggtgtttggcatcccacaagagatagcagtaccaatgggagc 739
Query: 538 cacggctctttataccatacactaagataccaacagcaatggaaatgcaaggctgcatga 597
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 catggctctttataccatacactaagataccaacagcaatggaaatgcaaggctgcatga 799
Query: 598 ccactagatactgcctgacaccacgcatagtcag 631
||||||||||||||||||||||||||||||||||
Sbjct: 800 ccactagatactgcctgacaccacgcatagtcag 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_l07.g1 MSMg01no157_l07.g1 CHROMAT_FILE:
MSMg01no157_l07.g1 PHD_FILE: MSMg01no157_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:06 2005
(287 letters)
>mm_chr4_108902296_108902981
Length = 686
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 agggagtctgatggaagagaccttccagtaagcaacagtaaccagaggagtgaagcatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agggagtctgatggaagagaccttccagtaagcaacagtaaccagaggagtgaagcatgg 427
Query: 61 gagcagagggcagcaagggtgatgagattctacaaatcacaggctactgcccatcaggga 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aagcagagggcagcacgggtgatgagattctacaaatcacaggctactgcccatcaggga 367
Query: 121 gggcttgggaaaaaagcaaaaccgaagaactgaaatggcaggaagaagaggcgtgggtgt 180
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 366 gggcttggg-aaaaagcaaaaccgaagaactgaaatggcaggaagaagaagcgtgggtgt 308
Query: 181 tccgaacagaaaggttgcacatcaaaagaccagagagggagaagatgcgggggaggggag 240
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 307 tctgaacagaaaggttgcacatcaaaagaccagagagggagaggatgcgggggaggggag 248
Query: 241 gagcagtgcattagctgacgttggaggctgccagctcttcttctacc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gagcagtgcattagctgacgttggaggctgccagctcttcttctacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
