Query= MSMg01no157_p06.b1 MSMg01no157_p06.b1 CHROMAT_FILE:
MSMg01no157_p06.b1 PHD_FILE: MSMg01no157_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:24 2005
(321 letters)
>mm_chr4_102215712_102216432
Length = 721
Score = 619 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 1 gatgggtccaggttaatggaagcagccaatgagtccttagggtagtagcatactcttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gatgggtccaggttaatggaagcagccaatgagtccttagggtagtagcatactcttgcc 461
Query: 61 ccttcttgattttcctgtctctatgattgacatccactgtggtggaaatagcatccttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccttcttgattttcctgtctctatgattgacatccactgtggtggaaatagcatccttga 401
Query: 121 gcatacctcatgtcacaatatcaaatgtgtggggcccagcagccttagagtgaaccccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcatacctcatgtcacaatatcaaatgtgtggggcccagcagccttagagtgaaccccgc 341
Query: 181 agaattatgtcctaagataaaaggtcctatgaggtattttgtcctaagtacccaaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agaattatgtcctaagataaaaggtcctatgaggtattttgtcctaagtacccaaaattt 281
Query: 241 ctacaaagaaccctcatcaatttaagaatttttgagaacccctgccatttcccctcattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctacaaagaaccctcatcaatttaagaatttttgagaacccctgccatttcccctcattc 221
Query: 301 ttttttctttccataatgga 320
||||||||||||||||||||
Sbjct: 220 ttttttctttccataatgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_p06.g1 MSMg01no157_p06.g1 CHROMAT_FILE:
MSMg01no157_p06.g1 PHD_FILE: MSMg01no157_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:24 2005
(287 letters)
>mm_chr4_102072708_102073396
Length = 689
Score = 532 bits (275), Expect = e-155
Identities = 285/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 aatccaggccactgaccataaacaagtttttagaaggtattctggaagg--ttttttttt 58
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aatccaggccactgaccataaacaagtttttagaaggtattctggaaggttttttttttt 260
Query: 59 ttaaatggaggaaagacatgcctgtcttctcctatttcattttttttccatttattcttc 118
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaatggaggaaagacatgcctgtcttctcctatttcattttttttccatttattcttc 320
Query: 119 tttctagtcagtcttcaaagatagccatctcttaactaggatggcttacgctaagaatcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctagtcagtcttcaaagatagccatctcttaactaggatggcttacgctaagaatcc 380
Query: 179 tagaggaagaaagaaagaaagatagctactctggtttgacaaacttccataaagttccac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaggaagaaagaaagaaagatagctactctggtttgacaaacttccataaagttccac 440
Query: 239 cttcacctttacaagccagtgcacccatgaaatatttaacttcctcagg 287
|||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcacttttacaagccagtgcacccatgaaatatttaacttcctcagg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 689
Length adjustment: 9
Effective length of query: 278
Effective length of database: 680
Effective search space: 189040
Effective search space used: 189040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
