XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCAAGTCCTCCACCCCTTCTGAGCCAGGCCCCCACCTCCAGATGCCACCT
CCTCCTTCCTTTGCCACACAGCCAGACCCACCAAGTGAGTGCTTGCCATG
TGCCATCTGTTCTCTATATACCATTAAGCAGGGAGGCCCCGAGGTGCTGG
CCATGGTCCCTGGGTGCACCTTCCTCTCTGAACAGCTTCCCGTGGTGGCG
GGACCTGTTTGGGCTCGCTTTTCTACCTAGTGTTCAGAAAATCCTCCTAC
TCACTTTATTGGCGAGGAGACTGAAGATAAGGAATAATGGCAAGGTTCTG
TTCTGAGAGCTTCCTTCTGTTGCCTCATTGCAGCCCTGAAACAGCTCACC
TTCATCCTGGGGTGCCAGAGCAGGGGTGCAGCCTGCTCTCTCAGCCACTC
CCTATGCAGCCGCAAGCTAGCTGGGACATGGCAGGCTCAGGCATCTACCC
AGGTCACCCAAGGCTTTAGTCCCCAACAGGGATGCCCTCTCCAGAGCTTG
GATCCTTGGTGTCAGTCAGAACTGTCCTTGGCTTCTCTCACCTGCCCCAT
TGCTCTTTCCTCTGGCCCACCCTTTGCAGCACCTGAAGACCAGGCTGGGG
CAGAGGGGTCCCAATCCTCGAACTTAAAACATCAGAGGGCCAGGCAGCGC
CTTTAATCCTAGCACTTGGGAGGT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGTTGAGCCCCATTTTTTAAGGGGTTA
TTTGATTTTCTGGAGTCCACCTTCTTAAGTTCTTTATATATATTAGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTATTG
GTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTACAAAAGCTTTGC
AATTTTATGAGGTCCTATTTGTCGATTCTCGATCTTACAGCACAAGCCAT
TGTTGTTCTGTTCAGGAATTTTCCCCCTATGCCCATATCTTCGAGGCTTT
TCCTCACTTTCTCCTCTATAAGTTTCACTGTTTCTGGTTTTATGTGGAGT
TCCTTGATCCACTTACATTTGACCTTAGTACAAGGAGATAGGAATGGATC
AATTCTCATTCTTCTAAATGATAATCACCAATTGTGCCAGCACCATTTGT
TGAAAATGCTGTCTTTTGACCATAGTTGTGTGGGTTCATTTCTGGGTCTT
CAATTCTATTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCA
GTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTGAT
TCCACCACAGGTTCTTTTATCATTGAGAAGAGTTTTTGCTATCCTAGGTT
TTCTGTTATTCCAGATGAATTN

Query= MSMg01no157_p23.b1 MSMg01no157_p23.b1 CHROMAT_FILE:
MSMg01no157_p23.b1 PHD_FILE: MSMg01no157_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:27 2005
         (637 letters)



>mm_chr4_109072922_109073958
          Length = 1037

 Score = 1193 bits (617), Expect = 0.0
 Identities = 629/633 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaagtcctccaccccttctgagccaggcccccacctccagatgccacctcctcc 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagtcctccaacccttctgagccaggcccccacctccagatgccacctcctcc 264

                                                                       
Query: 65  ttcctttgccacacagccagacccaccaagtgagtgcttgccatgtgccatctgttctct 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcctttgccacacaggcagacccaccaagtgagtgcttgccatgtgccatctgttctct 324

                                                                       
Query: 125 atataccattaagcagggaggccccgaggtgctggccatggtccctgggtgcaccttcct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atataccattaagcagggaggccccgaggtgctggccatggtccctgggtgcaccttcct 384

                                                                       
Query: 185 ctctgaacagcttcccgtggtggcgggacctgtttgggctcgcttttctacctagtgttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctgaacagcttcccgtggtggcgggacctgtttgggctcgcttttctacctagtgttc 444

                                                                       
Query: 245 agaaaatcctcctactcactttattggcgaggagactgaagataaggaataatggcaagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaaatcctcctactcactttattggcgaggagactgaagataaggaataatggcaagg 504

                                                                       
Query: 305 ttctgttctgagagcttccttctgttgcctcattgcagccctgaaacagctcaccttcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctgttctgagagcttccttctgttgcctcattgcagccctgaaacagctcaccttcat 564

                                                                       
Query: 365 cctggggtgccagagcaggggtgcagcctgctctctcagccactccctatgcagccgcaa 424
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctggggtgtcagagcaggggtgcagcctgctctctcagccactccctatgcagccgcaa 624

                                                                       
Query: 425 gctagctgggacatggcaggctcaggcatctacccaggtcacccaaggctttagtcccca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 625 gctagctgggacatggcaggctcaggcatctacccaggtcacccaaggctttattcccca 684

                                                                       
Query: 485 acagggatgccctctccagagcttggatccttggtgtcagtcagaactgtccttggcttc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acagggatgccctctccagagcttggatccttggtgtcagtcagaactgtccttggcttc 744

                                                                       
Query: 545 tctcacctgccccattgctctttcctctggcccaccctttgcagcacctgaagaccaggc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctcacctgccccattgctctttcctctggcccaccctttgcagcacctgaagaccaggc 804

                                            
Query: 605 tggggcagaggggtcccaatcctcgaacttaaa 637
           |||||||||||||||||||||||||||||||||
Sbjct: 805 tggggcagaggggtcccaatcctcgaacttaaa 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)