Query= MSMg01no159_k23.b1 MSMg01no159_k23.b1 CHROMAT_FILE:
MSMg01no159_k23.b1 PHD_FILE: MSMg01no159_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:27 2005
(325 letters)
>mm_chr4_135283431_135284155
Length = 725
Score = 623 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Minus
Query: 4 ggaattccaggacctgggcgagatccaagggaggttcctttcttgggtgcagacaaggca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggaattccaggacctgggcgagatccaagggaggttcctttcttgggtgcagacaaggca 466
Query: 64 ccagcagcggaagggcttgtttatctggtctggtgactgattcatcccaaggcccctggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccagcagcggaagggcttgtttatctggtctggtgactgattcatcccaaggcccctggt 406
Query: 124 ggtgcggccgtgcaccagagagttaggaaaggcaaggccgaagagcagtcttatcagtcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggtgcggccgtgcaccagagagttaggaaaggcaaggccgaagagcagtcttatcagtcc 346
Query: 184 gtaattggctcatatcaaagcctgccccgggtgtgttgcatatcgtctgtcctaataatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtaattggctcatatcaaagcctgccccgggtgtgttgcatatcgtctgtcctaataatt 286
Query: 244 ccattacaagaggatttatcccaaggaaaagaacaggacatgagtaagagaataccttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccattacaagaggatttatcccaaggaaaagaacaggacatgagtaagagaataccttca 226
Query: 304 acaatgacttcttggcttgatt 325
||||||||||||||||||||||
Sbjct: 225 acaatgacttcttggcttgatt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_k23.g1 MSMg01no159_k23.g1 CHROMAT_FILE:
MSMg01no159_k23.g1 PHD_FILE: MSMg01no159_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:27 2005
(293 letters)
>mm_chr4_135120982_135121673
Length = 692
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 gcctcttcatgaatgaatgacaacttagaacagaaaggggtgatgtctatcctcttaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctcttcatgaatgaatgacaacttagaacagaaaggggtgatgtctatcctcttaggt 260
Query: 61 caccttccctgggttctgcccaggttcccagttggtgtccctgtctaagacagaacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccttccctgggttctgcccaggttcccagttggtgtccctgtctaagacagaacccct 320
Query: 121 gagccgtcagaacgtgggaggagagtggagagctagttaggaaaggactgggcctcaggc 180
|||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||
Sbjct: 321 gagccgtcag-acgtgggaggagagcggagagctagttagaaaaggactgggcctcgggc 379
Query: 181 cacaagtgtgatgacctcagatcccagtcaggacacagcacggagagcccagtgcaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacaagtgtgatgacctcagatcccagtcaggacacagcacggagagcccagtgcaccat 439
Query: 241 gggaagaaggcacacaagctcaagggttggggagctgtgcgttcttgaggtg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gggaagaaggcacacaagctcaagggttggggagctgtgcgttcttgaggtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
