Query= MSMg01no160_o14.b1 MSMg01no160_o14.b1 CHROMAT_FILE:
MSMg01no160_o14.b1 PHD_FILE: MSMg01no160_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:00 2005
(324 letters)
>mm_chr4_97661556_97662284
Length = 729
Score = 553 bits (286), Expect = e-162
Identities = 305/314 (97%), Gaps = 5/314 (1%)
Strand = Plus / Plus
Query: 16 gaattcagaagagaaaagtcagtagttatggcttgggtacatgcaaagttactatagcaa 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcagaagagaaaagtcagtagttatggcttgggtacatgcaaagttactatagcaa 275
Query: 76 ctagaatatgctttggtttgtttcaactaggttactttcaatggaaaataatgtgtaaca 135
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 276 ctagaatatgctttggtttgtttcaactaggttactttcaatggaaaataatgtgtaata 335
Query: 136 tcttttctgtgtccttacagatagatatgtgaattcttcatatttttaatacaaggaatt 195
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 336 tcttttctgtgtccttacagatagataagtgaattcttcatatttttaatacaaggaatt 395
Query: 196 attccagaaatcagaaatatcacaaatttctccaatgaatggcaaataatttagttatca 255
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 396 attccagaaatcagaaatatcacaaatttctccaataaatggcaaataatttagttatca 455
Query: 256 aacaacttgccatatgaaatatgtcataa-----attatgctaaggttaaaatttggcct 310
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 456 aacaacttgccatatgaaatatgtcataatataaattatgctaaggttaaaatctggcct 515
Query: 311 tacttgaagccata 324
||||||||||||||
Sbjct: 516 tacttgaagccata 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 729
Length adjustment: 9
Effective length of query: 315
Effective length of database: 720
Effective search space: 226800
Effective search space used: 226800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_o14.g1 MSMg01no160_o14.g1 CHROMAT_FILE:
MSMg01no160_o14.g1 PHD_FILE: MSMg01no160_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:00 2005
(210 letters)
>mm_chr4_97815273_97815882
Length = 610
Score = 360 bits (186), Expect = e-104
Identities = 204/210 (97%)
Strand = Plus / Minus
Query: 1 tcttgaaggacagaaactttgcagcattttggcaattattactgaaaaagcacccagaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 410 tcttgaaggacagaaactttgcagcattttggcaattattactgaaaaagtgcccagaga 351
Query: 61 gaaagtataatagttttaaacataattaggattcaattttaaggggaaatcataaacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaaagtataatagttttaaacataattaggattcaattttaaggggaaatcataaacttc 291
Query: 121 ccatttaaggctaaggtttgatctactgtgaagcaaaaaaggaagaagctattacaaatt 180
|||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 290 ccatttaatgctaatgtttgatctactgtgaagcagaaaagggagaagctattacaaatt 231
Query: 181 tgctaataccatcaaaacttacaaagtgat 210
||||||||||||||||||||||||||||||
Sbjct: 230 tgctaataccatcaaaacttacaaagtgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
