XXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAAGATCCGCGGAATTCTCAA
CTGAGTTCCACCAAATGGCTGAGAAGCACCTGAAAAAAATGTTCAAAGTC
CTTAATCATCAGGGAAATGCAAATCAAAACAACCTTAAGATTCCATCTCA
CACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGACAGCATACGCTGG
TGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAA
GCTTGTACAACCACTCTGGAAGTCAGTTTGGAGGTTCCTCAGCAAAGTGG
ACATAATACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCA
GAAAATGTTCCAACTGGTAATAAGAACACATGCTCTACTATGTTCATAGC
AGCCTTATTTATAATAGCCAGAAGCTAGAAAGAACCCAGATGTCCCTCAA
CAGAAGAATGGATACAGAAAATGTGGTACATTTACACAATGTAGTACTAC
TCAGCTATTAAAAACAATGGATTTATTACATTTTTGTACAAATGGATGTA
TCTGGAGGATATCATCCTTACTGAGGTAACCCAATCACAAAAGAAGTCAT
TAGATATGCACTCACTGATACGTGGATATTAGCCCAGAAACATAGAACAC
CCAAGATACAATTTGCAAAACACAAGACAATCAAGAAGAGGGAAGACCAA
GGGGTGGATACTTCATTCCTCCTTAGAATAGGGA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGACACTAATAGGTTTGAATATGTCCATTTCTGA
AATCAGAATTTGTTTTCAATTTTATTTTCAAATATAAATCTAGAGAAGGT
AATTTGTAACTTTTTTTGGGGTCACCCTATTATAAAAGAGGGAGAGTGTG
AATGTGCGTCTTGCAGAATGTTGTACATATTAAAACTATCTTTCCTGAAT
TAGGCTTTTCCATTTTTTACTAACTTATTACCTGTTGATTTGTGAGTTAT
GTATAATATAATGTGTAGAATTGTAAATTAAATTTATTGAACTGGTCCTT
CATTTTTAGGAGAAAAAATTCTTTCCCAAACTATGAACATGGCAGTAGCT
CTGTCTTAGCTTTTTGAAACTGAGTTCGCCTCAGTAATACAAAATCAGTT
ATTAAAAAAAAATCAGTTATTAGCTCTATATGAATCCATCTCTGAAAGGA
CGTGTTAGTGACTACCCTTGTGACTGAGCGTTGCGCCACCTGACAGGTTT
ACTGCTGCCCTTCCAATGACTCTCAAAGTGTCTAGCTCCCGTTGAGAGCC
TCTAAAATTCTGCTCAGCTTTGGGTCTTCATGCGTTTTAAACCAGAGTAC
ACTGGAGTTTCAGACAGTTTTATTTAAGTATCATTCCCAGATATTCTCTG
TTTTTACATAGTTACCTTCATCAGCCATT

Query= MSMg01no165_l23.g1 MSMg01no165_l23.g1 CHROMAT_FILE:
MSMg01no165_l23.g1 PHD_FILE: MSMg01no165_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:01 2005
         (663 letters)



>mm_chr4_9556390_9557450
          Length = 1061

 Score = 1226 bits (634), Expect = 0.0
 Identities = 656/664 (98%), Gaps = 4/664 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agacactaataggtttgaatatgtccatttctgaaatcagaatttgttttcaattttatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 agacactaataggtttgaatatgtccatttctgaaatcagaatttgttttcaattttatt 802

                                                                       
Query: 61  ttcaaatataaatctagagaaggtaatttgtaactttttttggggtcaccctattataaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttcaaatataaatctagagaaggtaatttgtaactttttttggggtcaccctattataaa 742

                                                                       
Query: 121 agagggagagtgtgaatgtgcgtcttgcagaatgttgtacatattaaaactatctttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agagggagagtgtgaatgtgcgtcttgcagaatgttgtacatattaaaactatctttcct 682

                                                                       
Query: 181 gaattaggcttttccattttttactaacttattacctgttgatttgtgagttatgtataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaattaggcttttccattttttactaacttattacctgttgatttgtgagttatgtataa 622

                                                                       
Query: 241 tataatgtgtagaattgtaaattaaatttattgaactggtccttcatttttaggagaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataatgtgtagaattgtaaattaaatttattgaactggtccttcatttttaggagaaaa 562

                                                                       
Query: 301 aattctttcccaaactatgaacatggcagtagctctgtcttagctttttgaaactgagtt 360
           ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 561 aattctttcccaaactatgaacacggcagtagctttgtcttagctttttgaaactgagtt 502

                                                                       
Query: 361 cgcctcagtaatacaaaatcagttattaaaaaaaaatcagttattagctctatatgaatc 420
           |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||
Sbjct: 501 cgcctcagtaatacaaaatcagttatt--aaaaaaatcagttattagctctatatgcatc 444

                                                                       
Query: 421 catctctgaaaggacgtgttagtgactacccttgtgactgag-cgttgcgccacctgaca 479
           |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 443 catctctgaaaggacgtgttagtgactacccttgtgactgagccg-tgcgccacctgaca 385

                                                                       
Query: 480 ggtttactgctgcccttccaatgactctcaaagtgtctagctcccgttgagagcctctaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtttactgctgcccttccaatgactctcaaagtgtctagctcccgttgagagcctctaa 325

                                                                       
Query: 540 aattctgctcagctttgggtcttcatgcgttttaaaccagagtacactggagtttcagac 599
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 aattctgctcagctttgggtcttcatgtgttttaaaccagagtacactggagtttcagac 265

                                                                       
Query: 600 agttttatttaagtatcattcccagatattctctgtttttacatagttaccttcatcagc 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agttttatttaagtatcattcccagatattctctgtttttacatagttaccttcatcagc 205

               
Query: 660 catt 663
           ||||
Sbjct: 204 catt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1061
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1051
Effective search space:   686303
Effective search space used:   686303
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)