Query= MSMg01no166_b15.b1 MSMg01no166_b15.b1 CHROMAT_FILE:
MSMg01no166_b15.b1 PHD_FILE: MSMg01no166_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:30 2005
(193 letters)
>mm_chr4_62222533_62223124
Length = 592
Score = 265 bits (137), Expect = 1e-75
Identities = 178/193 (92%), Gaps = 7/193 (3%)
Strand = Plus / Plus
Query: 4 ggaattctgtagtccagaggcttcgaatttggggaagttgaaagctattgatgaactgac 63
||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctgtagtccagaggctttgaa-ttggggaagttgaaagctattgatgacctgac 262
Query: 64 atcattaggacagactcaggaaggtgaaaataccaaaggcagcctaaggcactaatactg 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atcattaggacagactcagggaggtgaaaataccaaaggcagcctaaggcactaatactg 322
Query: 124 tttttcattctctctctctctctctctctctccctccctc-c---ctccctc-c-ccctc 177
|||||||||||||||||||||||||||||||| ||| ||| | ||| ||| | ||| |
Sbjct: 323 tttttcattctctctctctctctctctctctctctctctctctgtctctctctctcccac 382
Query: 178 cctccttccctcc 190
||||| |||||||
Sbjct: 383 cctccctccctcc 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 592
Length adjustment: 8
Effective length of query: 185
Effective length of database: 584
Effective search space: 108040
Effective search space used: 108040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_b15.g1 MSMg01no166_b15.g1 CHROMAT_FILE:
MSMg01no166_b15.g1 PHD_FILE: MSMg01no166_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:30 2005
(247 letters)
>mm_chr4_62365770_62366416
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 catctgcctgactctgttctccaggactttggtttccatggcaacttggggtttggaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 catctgcctgactctgttctccaggactttggtttccatggcaacttggggtttggaagg 388
Query: 61 tagaggggtctggctcatggctatatccccgaaaccccccaaaaaagaagacagtgattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tagaggggtctggctcatggctatatccccgaaaccccccaaaaaagaagacagtgattc 328
Query: 121 tctgggtgtggccagtcacttttccaagcacaagacgtcgtcacgggagagtcaggccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctgggtgtggccagtcacttttccaagcacaagacgtcgtcacgggagagtcaggccag 268
Query: 181 ggtggacatcctaagctctgatctagctctgctttgaaccacttggagaaacaagaagtg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 267 ggtggacatcctaagctctgatctagctctgctttgaaccacttgaagaaacaagaagtg 208
Query: 241 gcttggc 247
|||||||
Sbjct: 207 gcttggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
