Query= MSMg01no168_k15.b1 MSMg01no168_k15.b1 CHROMAT_FILE:
MSMg01no168_k15.b1 PHD_FILE: MSMg01no168_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:04 2005
(364 letters)
>mm_chr4_119778175_119778934
Length = 760
Score = 576 bits (298), Expect = e-169
Identities = 334/348 (95%), Gaps = 4/348 (1%)
Strand = Plus / Plus
Query: 17 gaattctagtcagagtagagcctagttatgtggccaaggtatttgtaaatatattttgag 76
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctagtcagagtagagcctagctatgtggccaaggtatttgtaaatatattttgag 276
Query: 77 tctgagtcttattttgggagcatggggctgggaggaaggattggtacgtaacttctatag 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tctgagtcttattttgggagcatggggctgggaggaaggattggtacgtaacttctatag 336
Query: 137 tttgccagctgctaccccaccctccttggccctggagtctcatccactgactacagagtt 196
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 337 tttgccagctgctaatgcaccctccttggccctggagtctcgtccactgactacagagtt 396
Query: 197 gtgtactctaagaccgtgggagtaaggatggacaatcccagtcatccctgatcctgagag 256
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 397 gtgtactctaagaccgtgggagtaaggatggacaatcccagtcatctctgatcctgagag 456
Query: 257 aacgtaaagcattcagtcagtcgcactggtgggactctgttctgcttcgtatgcatctgc 316
||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 457 aacttaaaacattcagtcagtcgcgctggtgggactctggtctgcttcgtatgcatctgc 516
Query: 317 tagtgggtaatttctccatggcatccatctgtgcaggtacaaacaggg 364
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 517 tagtgggtaatttctccatggcatc----tgtgcaggtacaaacaggg 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 760
Length adjustment: 9
Effective length of query: 355
Effective length of database: 751
Effective search space: 266605
Effective search space used: 266605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_k15.g1 MSMg01no168_k15.g1 CHROMAT_FILE:
MSMg01no168_k15.g1 PHD_FILE: MSMg01no168_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:04 2005
(324 letters)
>mm_chr4_119948725_119949448
Length = 724
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Minus
Query: 1 tcctgaggagccagaaagctctgaggaagggacaggaggccatggtagcaggagcccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcctgaggagccagaaagctctgaggaagggacaggaggccatggtagcaggagcccctg 463
Query: 61 gagagaccatgccaaaagggaggctcaagaggaccctggtagctggtggcaggatcttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gagagaccatgccaaaagggaggctcaagaggaccctggtagctggtggcaggatcttag 403
Query: 121 gaacggctcggtgggatcgtcaccagtaccagacatgaacaagtcagacactatgcgggg 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 402 gaacggctcgctgggatcgtcaccagtaccagacatgaacaagtcagacactatgcaggg 343
Query: 181 caccctccttcctccacacttctgtaatccccacaaacctcctcagtggaggagacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caccctccttcctccacacttctgtaatccccacaaacctcctcagtggaggagacagac 283
Query: 241 tttgggagagatgaactccagtctgcagttagcactgctatggggtggctcactgtctct 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tctgggagagatgaactccagtctgcagttagcactgctatggggtggctcactgtctct 223
Query: 301 gaagctggtggtgggaaggtgt 322
|| |||||||||||||||||||
Sbjct: 222 gaggctggtggtgggaaggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
