Query= MSMg01no169_d14.b1 MSMg01no169_d14.b1 CHROMAT_FILE:
MSMg01no169_d14.b1 PHD_FILE: MSMg01no169_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:51 2005
(311 letters)
>mm_chr4_17293370_17294080
Length = 711
Score = 487 bits (252), Expect = e-142
Identities = 274/284 (96%), Gaps = 9/284 (3%)
Strand = Plus / Minus
Query: 11 aattccagaggcatctgaagtttagtgtcatggagcatgagacctaggactatagtggtg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aattccagaggcatctgaagtttagtgtcatggagcatgagacctaggactatagtggtg 267
Query: 71 gacttaaaactcgcagaagtaccctccctaatacaaaaacactctcggaaatgcaa--ac 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 266 gacttaaaactcgcagaagtaccctccctaatacaaaaacactctcggaaatgcaaacac 207
Query: 129 acacacacacacacacacacacacacacacacacacacacacaaactcacacacactcac 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 acacacacacacacacacacacacacacacacacacacacacaaactcacacacactcac 147
Query: 189 acacacactcacacacacactcacacacacacacacactcacacacacactcacacac-t 247
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
Sbjct: 146 acacacactcacacacaca--cactcacacacacacactcacacacacactcacacacat 89
Query: 248 cactcacacacacacacacacacacactttacacacacacacac 291
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 88 -actcacacacacacacacacacacac---acacacacacacac 49
Score = 81.9 bits (42), Expect = 5e-20
Identities = 47/50 (94%), Gaps = 3/50 (6%)
Strand = Plus / Minus
Query: 259 acacacacacacacactttacacacacacacacacacacacacacacaca 308
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 210 acacacacacacacac---acacacacacacacacacacacacacacaca 164
Score = 80.0 bits (41), Expect = 2e-19
Identities = 46/49 (93%), Gaps = 3/49 (6%)
Strand = Plus / Minus
Query: 261 acacacacacacactttacacacacacacacacacacacacacacacac 309
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 210 acacacacacacac---acacacacacacacacacacacacacacacac 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 225
Number of extensions: 55
Number of successful extensions: 55
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 11
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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