Query= MSMg01no170_f18.b1 MSMg01no170_f18.b1 CHROMAT_FILE:
MSMg01no170_f18.b1 PHD_FILE: MSMg01no170_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:17 2005
(315 letters)
>mm_chr4_4360877_4361590
Length = 714
Score = 547 bits (283), Expect = e-160
Identities = 301/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttgtatggagtttcaaaaatattaaagtaactaatgtaaaaaactaaagtta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttgtatggagtttcaaaaatattaaagtaactaatgtaaaaaactaaagtta 264
Query: 65 tttctactatatagcatcttgtctttcataattcttatgttaacacatcattttaattac 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttctactatatagtatcttgtctttcataattcttatgttaacacatcattttaattac 324
Query: 125 aatgttaaattatctatggcatattttttcattatacttatcagagatttattagatata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 aatgttaaattatctatggcatattttttcattatacttatcagagatttattaggtata 384
Query: 185 ttttattccaatgcacatttatctatttctatccacttgtttcatgttgcttagcttcag 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 ttttattccaatgcacatttatctatttctatccacttgtttcatgttgtttagcttcag 444
Query: 245 catttttcttattgtttgttctcgtctttttgcctttttttggttaattttgtacccttt 304
||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 445 catttttcttactgtttgttcttgtctttttgcctttttttg-ttaattttgtacccttt 503
Query: 305 taactga 311
|||||||
Sbjct: 504 taactga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_f18.g1 MSMg01no170_f18.g1 CHROMAT_FILE:
MSMg01no170_f18.g1 PHD_FILE: MSMg01no170_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:17 2005
(287 letters)
>mm_chr4_4508167_4508853
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Minus
Query: 1 agcagtaattcagaaagcaagaaaaagcacacatttcagaagtgtatgaggaaagacata 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 487 agcagtaattcagaaagcaagaaaaagcatacatttcagaagtgtatgaggaaagacata 428
Query: 61 gatctgataatttccatacatttatgcataggtattattgttaacaagagctattgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gatctgataatttccatacatttatgcataggtattattgttaacaagagctattgcaca 368
Query: 121 aaacctcagaatccccagaagagactttcagaggcattttatctttttataacacctaaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaacctcagaatccccagatgagactttcagaggcattttatctttttataacacctaaa 308
Query: 181 atccatactcgtgatttctaatatgatattcagttattaaaatgttctattttttcaaaa 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atctatactcgtgatttctaatatgatattcagttattaaaatgttctattttttcaaaa 248
Query: 241 agtatttttattttaatgtgtattattatttgccagcatgtatatat 287
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 247 agtatttttattttaatgtgtattattatttgccagcgtgtatatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
