Query= MSMg01no171_m17.b1 MSMg01no171_m17.b1 CHROMAT_FILE:
MSMg01no171_m17.b1 PHD_FILE: MSMg01no171_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:05 2005
(320 letters)
>mm_chr4_104757822_104758541
Length = 720
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattcacagctgctatttaaagccacatcttggtacctccaaagctattctcaaggaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagctgctatttaaagccacatcttggtacctccaaagctattctcaaggaaa 264
Query: 65 attaagttcacttgcttcccacttcccaggagtcctatggacactggtaaatggactgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaagttcacttgcttcccacttcccaggagtcctatggacactggtaaatggactgga 324
Query: 125 aacaacactgagactaaaataacaaatacaacaaaactcttcattgtgtacacatgtctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaacactgagactaaaataacaaatacaacaaaactcttcattgtgtacacatgtctg 384
Query: 185 tgtgtttgcagtcacatgtgtatgttcttatggaggtcagagcaaatgtcttcctcaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgtttgcagtcacatgtgtatgttcttatggaggtcagagcaaatgtcttcctcaatc 444
Query: 245 accctacacctacttacctacctttcttcctccaaatgtccctcaaccaaagaaccgata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accctacacctacttacctacctttcttcctccaaatgtccctcaaccaaagaaccgata 504
Query: 305 aagtaaatgtgat 317
|||||||||||||
Sbjct: 505 aagtaaatgtgat 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_m17.g1 MSMg01no171_m17.g1 CHROMAT_FILE:
MSMg01no171_m17.g1 PHD_FILE: MSMg01no171_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:06 2005
(213 letters)
>mm_chr4_104882929_104883543
Length = 615
Score = 389 bits (201), Expect = e-113
Identities = 211/215 (98%), Gaps = 2/215 (0%)
Strand = Plus / Minus
Query: 1 gtatttttctcttggaataaaacgaagggacatcaaggggcaaatga--acacatacaat 58
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 415 gtatttttctcttggaataaaatgaagggacatcaaggggcaaatgaacacacatacaat 356
Query: 59 tctcctaagcacttttacaaaatactgaaattacatttgtgaaattgcttccagccctgg 118
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctcctaagtacttttacaaaatactgaaattacatttgtgaaattgcttccagccctgg 296
Query: 119 caaaatacacacagggaacagaaactctaaatatctgctaaattatcctttctaagagca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 caaaatacacacagggaacagaaactctaaatatctgctaaattatcctttctaagagca 236
Query: 179 aaacaaaaacaagcaaaggaagagcggaggggagt 213
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aaacaaaaacaagcaaaggaagagcggaggggagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 615
Length adjustment: 9
Effective length of query: 204
Effective length of database: 606
Effective search space: 123624
Effective search space used: 123624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
