Query= MSMg01no173_c15.b1 MSMg01no173_c15.b1 CHROMAT_FILE:
MSMg01no173_c15.b1 PHD_FILE: MSMg01no173_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:47 2005
(638 letters)
>mm_chr4_126896045_126897082
Length = 1038
Score = 1168 bits (604), Expect = 0.0
Identities = 633/648 (97%), Gaps = 12/648 (1%)
Strand = Plus / Plus
Query: 1 attaagggtttctaaaaatgaaaacactttaccccc-ccccccacagcattgcctttttt 59
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 196 attaagggtttctaaaaatgaaaacactttaccccctccccccacagcattg--tttttt 253
Query: 60 t------ctggtgctgggactcaagtctaaggctttgcacaagttagacaagagctctac 113
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttttttctggtgctgggactcaagtctaaggctttgcacaagttagacaagagctctac 313
Query: 114 cattgagctacatcttcatcttcatttttaaaatataagatccgggtagaatttaattga 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cattgagctacatcttcatcttcatttttaaaatataagatccgggtagaatttaattga 373
Query: 174 atgttgagagtctattgagattatcttagactttcttttcctatatggaatgtgatgtaa 233
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgttgagagtctactgagattatcttagactttcttttcctatatggaatgtgatgtaa 433
Query: 234 cagatgaatacattttccatgttggtctaatctttcaaacttgggataatctctgcttaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cagatgaatacattttccatgttggtctaatctttcaaacttgggataatctctgcttaa 493
Query: 294 tccaatcatgtgcttagattaaatttggctttacagggtttcagtagtgtcataagcaag 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tccaatcatgtgcttagattaaatttggctttacagggtttcagtagtgtcataagcaag 553
Query: 354 tgtatttcttgctttgaaaaagctagtcttgacataggcaatgcagtgtcaggaccccta 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtatttcttgctttgaaaaagctagtcttgacataggcaatgcagtgtcaggaccccta 613
Query: 414 ggctccttctcatttcctgctcttccaccttcttgtatgagttcagagccaaaaaaa--- 470
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 614 ggctccttctcatttcctgctcttccaccttcttgtatgagttaagagccaaaaaaaaaa 673
Query: 471 ggagtgtagttcaaaaattatatttactgcatctgtagtcttagcagttgaaaggagggt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggagtgtagttcaaaaattatatttactgcatctgtagtcttagcagttgaaaggagggt 733
Query: 531 agaaagagaaggatgctgtcttcttttataaaaagacttcctggaaattacagcaccttc 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agaaagagaaggatgctgtcttcttttataaaaagacttcctggaaattacagcaccttc 793
Query: 591 acttaaatcatatttactataagcacatcacatggggtaacctagctg 638
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 794 acttaaatcatatttactataagcacatcacatgggggaacctagctg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_c15.g1 MSMg01no173_c15.g1 CHROMAT_FILE:
MSMg01no173_c15.g1 PHD_FILE: MSMg01no173_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:47 2005
(246 letters)
>mm_chr4_127048132_127048778
Length = 647
Score = 439 bits (227), Expect = e-128
Identities = 242/249 (97%), Gaps = 6/249 (2%)
Strand = Plus / Minus
Query: 1 cataagtaaaaaaatggcagagatgggatttgaacccagaccgtggg--ccctggttaca 58
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 496 cataagtaaaaaaatggcagagatgggatttgaacccagaccgtggggt---tggtcaca 440
Query: 59 ataaactcaccgggctcccaaaggtattttt-ttattttgccaccagggcagtttcttcc 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 439 ataaactcaccgggctcccaaaggtatttttgttattttgccaccagggcagtttcttcc 380
Query: 118 tgttaatctcctcaccatgcaccatgcaccatgcaccatgcaccatgcaccatgcaccac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgttaatctcctcaccatgcaccatgcaccatgcaccatgcaccatgcaccatgcaccac 320
Query: 178 cccatcccactgccccatgaaaacattccactcctccaggctgcacccacagagctaaga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cccatcccactgccccatgaaaacattccactcctccaggctgcacccacagagctaaga 260
Query: 238 tttgaaccc 246
|||||||||
Sbjct: 259 tttgaaccc 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 8
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
