XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACA
GTTTCCCACAGACCCACACTGCTCCTCCCTGCAGTCTCTGTGACAACCCT
GCGTCTGCATCACTCTCTGGGATTAGAACAAGGGCAGGCAGCTCTGGGAG
GATTCATCCCTCACCCAGGCTTGCACAGTGTTACTACCCAAAACACCAGG
GGCCACAGTGCACATTCTTAAGCAAGAGACCCCAGCTCAGGGTCCAGTGG
CCACACACAAAATGAAGCAGCTTTGCTGACTGGGGAACAGGATCTGTGTG
TCCACCACTCAGCTCACAGCAGGGTAGTCACAAAAAAGGTGGCAGACCTT
TCATGCTTTTCTTTTTTTCTGGGAGCTGAGCCGGCCCATTAACCTCTATT
TTCATATTTATGCCAGTGCCTGGGGGGTCTGGGCAGAAGTCCTGGGAGTA
GTGACCATCGGGCCAAGCCCTGTTGGCAGGTCAGGATGTCAGGAGATGGG
GAAGGTTGCAGGGACTATCCCCTGCCCTCCAGCCCCGGTATCCCTTTATC
CTTCCCTCCATCTTTCCATGGTCAATTGTCACAGCCATTCACCTCCCCCC
CCAGCTACATCACCTCCCCCACGTTGCCCTCCATGACAGCTGTTGTCTCC
TCATGTGTCCCCAGTAGCCTCCACACTCTCTCAGCTCTCAGACAGTGGGC
AGACCCTGAGCG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACACAGGCCTTGCTCATCTGGCCT
CTGCAGGCAAAGGACAGGAGTATCACCCCAGACAGATGTGAGCAGAAGCC
TAGGCAGACTCTGGAATGATATGCAGCAAGTACCCTGGGGGAGACCTTAG
CTGGGTGTCCACTTCCCTGCCTGCACCCTGGCCCTTAGAATCCACAGGCT
CTGGATACACAGCACAGCCACAGGTAGTTTTGAAGACTTCTTCTCCCTTT
CTTAAGTTCATTATTTTTCTTCATTAGCTCTTATAACAAAAATAGATTTT
TAAGTCTGCCAGGGTGTGAGTGTGTGAGTATTTGCGTGGATTTTCCTGAA
ATAGATCACGACACTGTGAGCGTGTTCTAACACGTTTGCTGCTATTGATG
TTTTGAAGCAGCTCACTGTAATCTCAAGCTCCCAGCAATGACTCTGTGCC
TCAGCGGGAGTCACCAGGCCTGTCCCTGGCAATACTTTTCGAGAGTGTCC
ATTCCCATGGAAAAAGATCAGGCTATATCTATCAGGCAGGAACTAGAACC
AGATATTGCTGGGCACAGACGCTGGATTGGGCACACACTGTCCTAGGCAG
ATCCTTTCCTGCTGTAGATACTGGGAGCTTTGCTGAACTTGATGTTCAAC
TCAGATTCACCCCTCCTTGTTGTG

Query= MSMg01no173_i07.b1 MSMg01no173_i07.b1 CHROMAT_FILE:
MSMg01no173_i07.b1 PHD_FILE: MSMg01no173_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:13 2005
         (594 letters)



>mm_chr4_63077435_63078436
          Length = 1002

 Score = 1021 bits (528), Expect = 0.0
 Identities = 581/602 (96%), Gaps = 8/602 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccacactgctcctccctgca-----gtctctgtgacaaccctgcgtctgcatcactctct 55
           ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||
Sbjct: 802 ccacactgctcctccctgcacagtcgtctctgtgacaaccctgcgtctgcatcactctct 743

                                                                       
Query: 56  gggattagaacaagggcaggcagctctgggaggattcatccctcacccaggcttgcacag 115
           ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 742 gggattagaacaagggcaggcagctgtgggaggattcatccctcacccaagcttgcacag 683

                                                                       
Query: 116 tgttactacccaaaacaccaggggccacagtgcacattcttaagcaagagaccccagctc 175
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgttactaccccaaacaccaggggccacagtgcacattcttaagcaagagaccccagctc 623

                                                                       
Query: 176 agggtccagtggccacacacaaaatgaagcagctttgctgactggggaacaggatctgtg 235
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 agggtccagtggccacacacaaaatgaagcagctttgctgactggggaacaggatccgtg 563

                                                                       
Query: 236 tgtccaccactcagctcacagcagggtagtcacaaaaaaggtggcagacctttcatgctt 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgtccaccactcagctcacagcagggtagtcacaaaaaaggtggcagacctttcatgctt 503

                                                                       
Query: 296 ttctttttttctgggagctgagccggcccattaacctctattttcatatttatgccagtg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttctttttttctgggagctgagccggcccattaacctctattttcatatttatgccagtg 443

                                                                       
Query: 356 cct-ggggggtctgggcagaagtcctgggagtagtgaccatcgggccaagccctgttggc 414
           ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 cctgggggggtctgggcagaagtcctgggagtagtgaccatcaggccaagccctgttggc 383

                                                                       
Query: 415 aggtcaggatgtcaggagatggggaaggttgcagggactatcccctgccctccagccccg 474
           |||||||||||||| |||||||||||||||||||||||||| || ||||||||||| || 
Sbjct: 382 aggtcaggatgtcaagagatggggaaggttgcagggactatgccttgccctccagctcct 323

                                                                       
Query: 475 gtatccctttatccttccctccatctttccatggtcaattgtcacagccattcacct--c 532
           ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  |
Sbjct: 322 gtatcccttcatccttccctccatctttgcatggtcaattgtcacagccattcacctccc 263

                                                                       
Query: 533 cccccccagctacatcacctcccccacgttgccctccatgacagctgttgtctcctcatg 592
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cccccccagctccatcacctcccccacgttgccctccatgacagctgttgtctcctcatg 203

             
Query: 593 tg 594
           ||
Sbjct: 202 tg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 1002
Length adjustment: 10
Effective length of query: 584
Effective length of database: 992
Effective search space:   579328
Effective search space used:   579328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)