Query= MSMg01no174_k17.b1 MSMg01no174_k17.b1 CHROMAT_FILE:
MSMg01no174_k17.b1 PHD_FILE: MSMg01no174_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(314 letters)
>mm_chr4_137368615_137369329
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacttctttcc-aaatatcccaaagattagagaactttccctttggcccacgct 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattcacttctttccaaaatatcccaaagattagagaactttccctttggcccacgct 455
Query: 63 cagctggctgagacctgttgggaccagagagcaatcaaaacaacatgggctttgttttca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagctggctgagacctgttgggaccagagagcaatcaaaacaacatgggctttgttttca 395
Query: 123 ggggatgcttcctgcccacagccctgatccctgggggaaaaaaaaacataaacaaaatca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggggatgcttcctgcccacagccctgatccctgggggaaaaaaaaacataaacaaaatca 335
Query: 183 ccaggactcagtcaacattggtgggtcgaacattgtctcaacagtactgggctcagcatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccaggactcagtcaacattggtgggtcgaacattgtctcaacagtactgggctcagcatg 275
Query: 243 tttccagagacagtgataaccagagaaggtctgagaaggagagggtatgcatgtatatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttccagagacagtgataaccagagaaggtctgagaaggagagggtatgcatgtatatat 215
Query: 303 gtatgcatgtg 313
|||||||||||
Sbjct: 214 gtatgcatgtg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_k17.g1 MSMg01no174_k17.g1 CHROMAT_FILE:
MSMg01no174_k17.g1 PHD_FILE: MSMg01no174_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(287 letters)
>mm_chr4_137210924_137211610
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Plus
Query: 1 ttttctttctgcagtttgtatgccggaagagggctttaaaggtattgcatctgtcatgct 60
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 201 ttttctttctgcagtttgtatgccggaagagggctttaaaggtaaggcatttgtcatgct 260
Query: 61 tcctccatgccagagcctcaccgtgtctggtaatgtgcaggctgcaatttgattttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctccatgccagagcctcaccgtgtctggtaatgtgcaggctgcaatttgattttaatt 320
Query: 121 ttcaacccaatccaagtctcgtgactggaattaattttagctggaagcatttttattcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaacccaatccaagtctcgtgactggaattaattttagctggaagcatttttattcca 380
Query: 181 gcttctctcgttttcagcactgaggcctcagatgaggatccaggggaggttgggatgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttctctcgttttcagcactgaggcctcagatgaggatccaggggaggttgggatgtag 440
Query: 241 tgagtggcatttctagattgatatttaacctgcccggtgccctatct 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtggcatttctagattgatatttaacctgcccggtgccctatct 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
