Query= MSMg01no174_n05.b1 MSMg01no174_n05.b1 CHROMAT_FILE:
MSMg01no174_n05.b1 PHD_FILE: MSMg01no174_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:47 2005
(317 letters)
>mm_chr4_44609921_44610636
Length = 716
Score = 528 bits (273), Expect = e-154
Identities = 297/313 (94%), Gaps = 14/313 (4%)
Strand = Plus / Minus
Query: 5 gaattccatgcagtgtcccccctgcagtgccctctgcagtgccaccatgcagtgccccct 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 486 gaattccatgcagtgtcccccctgcagtaccctctgcagtgccaccatgcagtgccccct 427
Query: 65 gcagtgtcccctgcagtatccccctgcagtgcccccatgcattgtctccctgcagtgccc 124
||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 426 gcagtgtcccctgcagtatccccctgcagtg-cccca-------------tgcagtgccc 381
Query: 125 ctgcagtctccccctgcagtgacccctgaagtgaccccctgcagtgtcccccttgcagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 ctgcagtctccccctgcagtgacccctgaagtgaccccctgcagtgtcctccttgcagtg 321
Query: 185 tccccctgcagtgtcccccatgaagtgtccccatgccccactcaccatcctcctttctta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccccctgcagtgtcccccatgaagtgtccccatgccccactcaccatcctcctttctta 261
Query: 245 aaagtgcagtgtttgtttgtttgtttgtttagtttgttgttattgtttggcatttcaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagtgcagtgtttgtttgtttgtttgtttagtttgttgttattgtttggcatttcaaga 201
Query: 305 ctgtgtagccctg 317
|||||||||||||
Sbjct: 200 ctgtgtagccctg 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_n05.g1 MSMg01no174_n05.g1 CHROMAT_FILE:
MSMg01no174_n05.g1 PHD_FILE: MSMg01no174_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:47 2005
(288 letters)
>mm_chr4_44453083_44453770
Length = 688
Score = 484 bits (250), Expect = e-141
Identities = 280/292 (95%), Gaps = 5/292 (1%)
Strand = Plus / Plus
Query: 1 tgtgggccctgatggacagaaagatggaggtactgtaaaaattttctccgacccagctga 60
|||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 201 tgtgggcc-tgatggacagaaagatggaggtactgtaaaaaccttcttcgacccagctga 259
Query: 61 agtggcctctggttcacagaagtagggtgtggggatgctgttcgtatccatgggaactgg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 260 agtggcctctggttcacagaagtagggtgtggggatgctgtttgtatccatgggaaccgg 319
Query: 121 ggagtgattgaaaggccatctcttccttccctcttctccagcctcctgctcttcatttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggagtgattgaaaggccatctcttccttccctcttctccagcctcctgctcttcatttca 379
Query: 181 tttttgggcactgactatgaggtatttgggtatgatgtcttggatgattttatttattgg 240
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 tttttgggcactgactctgaggtatttaggtatgatgtcttggatgattttatttattgg 439
Query: 241 ttagtttctttcttgggtgattttatttt----atttattcattcattatta 288
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 ttagtttctttcttgggtgattttattttttttatttattcattcattatta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
