Query= MSMg01no175_d24.b1 MSMg01no175_d24.b1 CHROMAT_FILE:
MSMg01no175_d24.b1 PHD_FILE: MSMg01no175_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:17 2005
(319 letters)
>mm_chr4_48754465_48755184
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 9 gaattcactaacttttaagtcacttatttataaagccagctgaccatgactagtgcttag 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcactaacttttaagtcacttatttataaagccagctgaccatgactagtgcttag 268
Query: 69 taaggtactgtttagaatggccactgccaa-taaccagtactgtaacaatagtctttaga 127
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 269 taaggtactgtttagaatggccactgccaaataaccagtactgtaacaatagtctttaga 328
Query: 128 caaataaatgaaacttggatgagatgggattttaattagataagtacaaaatgttataaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caaataaatgaaacttggatgagatgggattttaattagataagtacaaaatgttataaa 388
Query: 188 tattttatatgtattgtgttaggtagttagatgtcaacaacaaaagctatattcatttga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tattttatatgtattgtgttaggtagttagatgtcaacaacaaaagctatattcatttga 448
Query: 248 gaagagggagcctcacttgagaaatgtcttcataagattggcaagtctgtggagcatttt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gaagagggagcctcacttgagaaatgtcttcataagattggcaagtctgtggagcatttt 508
Query: 308 tttgattagtaa 319
||||||||||||
Sbjct: 509 tttgattagtaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_d24.g1 MSMg01no175_d24.g1 CHROMAT_FILE:
MSMg01no175_d24.g1 PHD_FILE: MSMg01no175_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:17 2005
(207 letters)
>mm_chr4_48849969_48850575
Length = 607
Score = 393 bits (203), Expect = e-114
Identities = 206/207 (99%)
Strand = Plus / Minus
Query: 1 tatgtgaccttgtacaaaaatgtgagtcttgttcaattagtggagttattgcatttatct 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 407 tatgtgaccttgtacaaaaatgtgagtcttgttcaattagcggagttattgcatttatct 348
Query: 61 atatatctttgcagttacaaatgctactcagtcagtaagaaagacttagcacttgggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atatatctttgcagttacaaatgctactcagtcagtaagaaagacttagcacttgggata 288
Query: 121 taccaaaactgtgatgttggttgaccaccaagctctctcaacaactagaggagaaatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 taccaaaactgtgatgttggttgaccaccaagctctctcaacaactagaggagaaatagt 228
Query: 181 tcaagggtgccagctccttcttaagac 207
|||||||||||||||||||||||||||
Sbjct: 227 tcaagggtgccagctccttcttaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
