Query= MSMg01no176_k17.b1 MSMg01no176_k17.b1 CHROMAT_FILE:
MSMg01no176_k17.b1 PHD_FILE: MSMg01no176_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:42 2005
(314 letters)
>mm_chr4_137420850_137421563
Length = 714
Score = 574 bits (297), Expect = e-168
Identities = 310/315 (98%), Gaps = 4/315 (1%)
Strand = Plus / Plus
Query: 1 ttcccaccccaccaacagagagccc-c-ctttttccctctgtcccccagatccctaatgg 58
||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct: 201 ttcccaccccaccaacagagagcccacgcttt--ccctctgtcccccagatccctaatgg 258
Query: 59 ggttccttgctccgagcaggctgtttcctgttgttggcgctggatctccctggtactccc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggttccttgctccgagcaggctgtttcctgttgttggcgctggatctccctggtactccc 318
Query: 119 agctctccctccacccaggtccctaacctcttggcagaaaatcagcaatattcttaatgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agctctccctccacccaggtccctaacctcttggcagaaaatcagcaatattcttaatgg 378
Query: 179 cctcctgtcggaagccccccttcccatactcctccctctgtctgtccgccctcagcacaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 379 cctcctgtcggaagccccccttcccatactcctccctctgtctgtccgccctcagcgcaa 438
Query: 239 gctgtaggatgaaggctcccaagaggctttttatatctcctacctccagctgtcctcaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gctgtaggatgaaggctcccaagaggctttttatatctcctacctccagctgtcctcaaa 498
Query: 299 ccacccagcagcagg 313
|||||||||||||||
Sbjct: 499 ccacccagcagcagg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_k17.g1 MSMg01no176_k17.g1 CHROMAT_FILE:
MSMg01no176_k17.g1 PHD_FILE: MSMg01no176_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:42 2005
(314 letters)
>mm_chr4_137582507_137583220
Length = 714
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%)
Strand = Plus / Minus
Query: 1 acagattagtctgagtaaaagcaaaggtgatgggtagatttctgtctcggacccatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acagattagtctgagtaaaagcaaaggtgatgggtagatttctgtctcggacccatagaa 447
Query: 61 cagaacagaaaaccgtgtccaccctaaaggcaaagaagcctggagtgccccaagcttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cagaacagaaaaccgtgtccaccctaaaggcaaagaagcctggagtgccccaagcttcct 387
Query: 121 tagccatcagggctgaagctgcaagaaacaaagcgacaggagcccaaggaggaagcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagccatcagggctgaagctgcaagaaacaaagcgacaggagcccaaggaggaagcagtg 327
Query: 181 gcagccaggccaagaagcctccagatccaccgagtcctcccttgggttgctctcgtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcagccaggccaagaagcctccagatccaccgagtcctcccttgggttgctctcgtttgg 267
Query: 241 ctattgttgtgatttttgtcctggggtttgcgtggtttgtttttttctttagggggggtg 300
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 266 ctattgttgtgatttttgtcctggggtttgcgtggtttggttttttcttttgggggggtg 207
Query: 301 ggggtg 306
||||||
Sbjct: 206 ggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
