Query= MSMg01no181_a06.b1 MSMg01no181_a06.b1 CHROMAT_FILE:
MSMg01no181_a06.b1 PHD_FILE: MSMg01no181_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:23 2005
(317 letters)
>mm_chr4_127123464_127124180
Length = 717
Score = 524 bits (271), Expect = e-153
Identities = 301/311 (96%)
Strand = Plus / Plus
Query: 5 gaattcaactccattcatacggtaggccatccaaagacatcccagagggagtggagagac 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactccattcaaacggtaggccatccaaagacatcccagagggagtggagagac 264
Query: 65 aggcaacctatagcaagagctttgcaatgcgcacgattatcaagagcatcctgttgaaac 124
||||||||||||| |||||||||||||||| || ||||||||||||| ||||||||||||
Sbjct: 265 aggcaacctataggaagagctttgcaatgcacatgattatcaagagcgtcctgttgaaac 324
Query: 125 aaaacaaaaatcacaaactgttaaggattaatagagagtaacaagtggcccaagaggaaa 184
||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 aaagcaaaaatcgcaaactgttaaggattaacagagagtaacaagtggcccaagaggaaa 384
Query: 185 acgggtgaaaacaaaaccaagaactgagatgcttaaccagggccagtgaggtggcagagg 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 acgggtgaaaacaaaaccaagaactgagacgcttaaccagggccagtgaggtggcagagg 444
Query: 245 gtaaaggtggtgcttactgcgcatgctgacccgagtagggtcccaggagtccgcagattc 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 gtaaaggtggtgcttactgcgcatgctgacctgagtagggtcccaggagtccgcagattc 504
Query: 305 cacggtggaag 315
|||||||||||
Sbjct: 505 cacggtggaag 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_a06.g1 MSMg01no181_a06.g1 CHROMAT_FILE:
MSMg01no181_a06.g1 PHD_FILE: MSMg01no181_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:24 2005
(433 letters)
>mm_chr4_127293735_127294567
Length = 833
Score = 632 bits (327), Expect = 0.0
Identities = 343/351 (97%), Gaps = 5/351 (1%)
Strand = Plus / Minus
Query: 1 caaaccaacctgagatctgtagcaagacccaaaccaaacaagcaaaggatgacagactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caaaccaacctgagatctgtagcaagacccaaaccaaacaagcaaaggatgacagactca 292
Query: 61 gtttgaggaggctctgtctatctaggtttgggacaaataaagtgtaacgaaggataatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtttgaggaggctctgtctatctaggtttgggacaaataaagtgtaacgaaggataatgg 232
Query: 121 tgagtaggtggacagatatcatgatgtgttactacaatttcagcactcagaagggacaca 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 231 tgagtaggtggacagatatcatgatgtgttactacaattccagcactcagaagggacaca 172
Query: 181 caggaagatagagtttgagactatctttgactgcatggagagaccctgtctataaagaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 caggaagatagagtttgagactatctttgactgcatggagagaacctgtctataaagaaa 112
Query: 241 ttaaaacagggttggagagaggactccgcggttaggagcactga-----cttccagaggt 295
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 111 ttaaaacagggttggagagaggactccgcggttaggagcactgactgctcttccagaggt 52
Query: 296 cctgagttcaaatcccagcaaccacatggtggctcacaaccatctgtcatg 346
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 51 cctgagttcaaatcctagcaaccacatggtggctcacaaccatctgtcatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
