| Query= MSMg01no182_l23.g1 MSMg01no182_l23.g1 CHROMAT_FILE:
MSMg01no182_l23.g1 PHD_FILE: MSMg01no182_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:35 2005
(593 letters)
>mm_chr4_109939793_109940785
Length = 993
Score = 337 bits (174), Expect = 2e-96
Identities = 180/182 (98%)
Strand = Plus / Minus
Query: 1 tcttctaagtgggagttcaatgggggccaagcccgtctcttccacgggaagtaccacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcttctaagtgggagttcaatgggggccaagcccgtctcttccacgggaagtaccacttg 323
Query: 61 ctatgttctctgctctccccaccatacttttccggctgtaccctggaagactgactttcc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 322 ctatgttctctgctctccccaccatacttttccggctgcaccctggaagactgactttcc 263
Query: 121 aagtcagtgtgactgttccttcctggttcaagagcagagcacatggaagacaggacacgt 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 262 aagtcagtgtgactgttccttcctggttcaagagcagtgcacatggaagacaggacacgt 203
Query: 181 gc 182
||
Sbjct: 202 gc 201
Score = 74.2 bits (38), Expect = 3e-17
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 464 gtgcacatggaagacaggacacgtgctcatccaccctg 501
||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtgcacatggaagacaggacacgtgctcatccaccctg 189
Score = 74.2 bits (38), Expect = 3e-17
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 337 gtgcacatggaagacaggacacgtgctcatccaccctg 374
||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtgcacatggaagacaggacacgtgctcatccaccctg 189
Score = 72.3 bits (37), Expect = 1e-16
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 535 tgcacatggaagacaggacacgtgctcatccaccctg 571
|||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgcacatggaagacaggacacgtgctcatccaccctg 189
Score = 72.3 bits (37), Expect = 1e-16
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 500 tgcacatggaagacaggacacgtgctcatccaccctg 536
|||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgcacatggaagacaggacacgtgctcatccaccctg 189
Score = 72.3 bits (37), Expect = 1e-16
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 408 tgcacatggaagacaggacacgtgctcatccaccctg 444
|||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgcacatggaagacaggacacgtgctcatccaccctg 189
Score = 72.3 bits (37), Expect = 1e-16
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 373 tgcacatggaagacaggacacgtgctcatccaccctg 409
|||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgcacatggaagacaggacacgtgctcatccaccctg 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 7
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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