Query= MSMg01no184_g10.b1 MSMg01no184_g10.b1 CHROMAT_FILE:
MSMg01no184_g10.b1 PHD_FILE: MSMg01no184_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:45 2005
(299 letters)
>mm_chr4_135215402_135216100
Length = 699
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%)
Strand = Plus / Plus
Query: 5 gaattctgtcctttgagaacacaataagccagaggacccaccccacccgaatcccataac 64
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattctgtcctttgagaacacaatacgccagaggacccaccccacccaaatcccataac 264
Query: 65 tgcaggatccacggctcggagggacccacggatcggtggattacggcagacttactcaat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 tgcaggatccacggctcggagggacccacggatcggtggattacggcagacttactcagt 324
Query: 125 gagctaggtgctctccccaccttctggaatagaacatatctcagccattgtactgagact 184
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 325 gagctaggtgctctccccaccttctggaatagaacatatctcagccgttgttctgagact 384
Query: 185 ctgagatctgacatggagcaagctctcattccacagacttattaagttgttataaagtca 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 ctgagatctgacatggagcaagctctcattccacagacttattatgttgttataaagtca 444
Query: 245 accctgagctggctctgccctttctagaatattctgtatcccatcatttcaaagc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accctgagctggctctgccctttctagaatattctgtatcccatcatttcaaagc 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_g10.g1 MSMg01no184_g10.g1 CHROMAT_FILE:
MSMg01no184_g10.g1 PHD_FILE: MSMg01no184_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:45 2005
(245 letters)
>mm_chr4_135397299_135397948
Length = 650
Score = 458 bits (237), Expect = e-133
Identities = 244/249 (97%), Gaps = 5/249 (2%)
Strand = Plus / Minus
Query: 1 cagagcagttgactctggatgctttgaattaaattctgctacttctgtctcccagaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cagagcagttgactctggatgctttgaattaaattctgctacttctgtctcccagaccca 390
Query: 61 ttttcagccaaagtttctcctgattgcaggtagtatcacaaaataaaataaaaataagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttttcagccaaagtttctcctgattgcaggtagtatcacaaaataaaataaaaataagtt 330
Query: 121 ctgttgctcccagccttgatctctaacatgaaagaaaaacggtttaggcttcttcttc-- 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgttgctcccagccttgatctctaacatgaaagaaaaacggtttaggcttcttcttctt 270
Query: 179 ---tttttttttttttcctatgcacttgcaagttgaggcgctgtaatttacccaacacaa 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttttttttttttttttcctatgcacttgcaagttgaggcgctgtaatttacccaacacaa 210
Query: 236 attccagtg 244
|||||||||
Sbjct: 209 attccagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 650
Length adjustment: 9
Effective length of query: 236
Effective length of database: 641
Effective search space: 151276
Effective search space used: 151276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
