NNNCCGCCCCNNNNNATTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTT
TAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATAT
ATGTTGGATATTAGTCTCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGC
AGAAACTTTGGAGATAAGATACAATTTCCTAAACACATGAAACTCAAGAA
AAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAGAAGTGGGAACA
AAACACCCTTGGAAGGAGTTATTTTAGACAAAGCCCGCGAGCTGAGATAA
AAGGATGGACCATGTAGACACTACCATATCCGGGGATCCATCCCATAATC
AGCTTCCAAATGCTGACACCATTGCATACACTAGCAAGATTATGCTGAAA
GGACCCTGATATAGCTGTCTCTTCTCAGAGTATGCCTGGGCCTAGCAAAC
ATAGAAGTGGATGCTCACAGTCGGCTATTGGATGGATCACATGGCCCCCA
ATGAAGGAGCTAGAGAAAGTACCAAAGAAGCTAAAGGGATCTGCAACCCT
ATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTC
TAGCTGCATATGCAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTTGCCATATACAATGTGTTTCTAA
GTCATGGGGATTTGCCTTCCTCCATATTTCCTGTGTAATCTTCTATTGGA
TCCCCTGAGGATTTAACCAAAGCCCTCCACCAGCTCCATCTCAGCAGCTT
CACGATAGCTTTCTCCATCCTTTATTAGTGAGAAATTGGTTGTTCTTACT
GCCTTTTTTTGGTCATACTTTTGCTTCTAAATAATCCATAGTTTCTTGCT
TCCTACTATTCAGTTTTGTCACTCAGTCTTTCTCATCTGGTCACAAACTA
CAGACTGTTTATTGCCCAGCCTTCCCTTTTGTCTTTTTCTCTTCTTTGAA
CATGTTCTGTATTGTGTCCTCTCCCTGAAATGTCCCTCTAATAGTGTCAA
CTGCTGTTGAGTCATCTTTCAGTCACCTGAATTCTAGTCCAGTTGATTAT
TTCTTTTCATGGAGAGCTCAGGCTGGTGAGTACCATAGCACGCTATCTAT
CTTCTACTTCTTGTCTGCCGGAGACAGAAGCAGACTATGCCCCTTATCTG
GTGAACTGGGTATAGGACCCACAAGAAATATTTTTATTCCTATTCTTATA
GCCGGATCTATTTAACATTCTGTATGAACATATCCATTAAGCAACACGAG
C

Query= MSMg01no184_i20.g1 MSMg01no184_i20.g1 CHROMAT_FILE:
MSMg01no184_i20.g1 PHD_FILE: MSMg01no184_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:58 2005
         (529 letters)



>mm_chr4_64608042_64608970
          Length = 929

 Score =  868 bits (449), Expect = 0.0
 Identities = 506/539 (93%), Gaps = 24/539 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttgccatatacaatgtgtttctaagtcatggggatttgccttcctccatatttcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgccatatacaatgtgtttctaagtcatggggatttgccttcctccatatttcctgt 260

                                                                       
Query: 61  gtaatcttctattggatcccctgaggatttaaccaaagccctccaccagctccatctcag 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 gtaatcttctattggatcccctgaggatttaaccaaagcccttcaccagctccatctcag 320

                                                                       
Query: 121 cagcttcacgatagctttctccatcctttattagtgagaaattggttgttcttactgcct 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcttcatgatagctttctccatcctttattagtgagaaattggttgttcttactgcct 380

                                                                       
Query: 181 ttttttggtcatacttttgcttctaaataatccatagtttcttgcttcctactattcagt 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttagtcatacttttgcttctaaataatccatagtttcttgcttcctactattcagt 440

                                                                       
Query: 241 tttgtcactcagtctttctcatctggtcacaaactacagactgtttattgcccagccttc 300
           |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 441 tttgtcgctcagtctttctcatctggtcacaaactacagactgtttagtgcccagtcttc 500

                                                                       
Query: 301 ccttttgtctttttctcttct----------ttgaacatgttctgtattgtgtcctctcc 350
            ||||||||||||||||||||          |||||||||||||||||||||||||||||
Sbjct: 501 tcttttgtctttttctcttctgccatcttctttgaacatgttctgtattgtgtcctctcc 560

                                                                       
Query: 351 ctgaaatgtccctctaatagtgtcaactgctgttgagtcatctttcagtcacctgaattc 410
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgaaatgtccctctaagagtgtcaactgctgttgagtcatctttcagtcacctgaattc 620

                                                                       
Query: 411 tagtccagttgattatttcttttcatggagagctcaggctggtgagtaccatagcacgct 470
           ||             ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 ta-------------tttcttttcatggagagctcaggctggcgagtaccatagcacgct 667

                                                                      
Query: 471 atctatcttctacttcttgtctgccggagacagaagcagactatgccccttatctggtg 529
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 668 atctatcttctacttcttgtctgccggagacagaagcagactatgccc-ttatctggtg 725


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)