Query= MSMg01no185_b15.b1 MSMg01no185_b15.b1 CHROMAT_FILE:
MSMg01no185_b15.b1 PHD_FILE: MSMg01no185_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:43 2005
(273 letters)
>mm_chr4_97158418_97159091
Length = 674
Score = 445 bits (230), Expect = e-129
Identities = 248/256 (96%), Gaps = 5/256 (1%)
Strand = Plus / Plus
Query: 21 ctctgagttttaaccacttgtagagagtccaacatacatgacctgctctgtgtgc---cc 77
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 221 ctctgagttttaaccacttgcagagagtccaacatacatgacctgctctgtgtgcaaac- 279
Query: 78 cactaaggaagttcttcctctagagctgacactgtgaggtacagatcagagcatatctca 137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 -actaaggaagttcttcctctagagctgacactgtgaggtacagatcagagcatatctca 338
Query: 138 catgtatgagttgcagcccactaacttctcatatcaggttttatattattccttcacact 197
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 339 catgtatgagttgcagcccattaacttctcatatcaggttttatattattccttcacact 398
Query: 198 ttttgaagagaaattatgttctgtgtttggatgccaaggacctacttgctagctgagaat 257
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 399 ttttgaagagaaattatgttctgtgtttggatgtcaaggacctacttgctagctgagaat 458
Query: 258 aatcttaccttaatat 273
||||||||||||||||
Sbjct: 459 aatcttaccttaatat 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_b15.g1 MSMg01no185_b15.g1 CHROMAT_FILE:
MSMg01no185_b15.g1 PHD_FILE: MSMg01no185_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:43 2005
(291 letters)
>mm_chr4_97316818_97317507
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 tctgagtgctctccgccatagcctagagagctcttcaaaagtgttcctttacccacacat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tctgagtgctct-cgccatagcctagagagctcttcaaaagtgttcctttacccacacat 431
Query: 61 gctttgcagtccattgtaaggagaaatggccacttttcagattaagtgggcagaaaccaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gctttgcagtccactgtaaggagaaatggccacttttcagattaagtgggcagaaaccaa 371
Query: 121 gtcagcaacagtcctctaaaaggaacttggtgaccagggtaagcagagaacgcaggcctc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtcagcaatagtcctctaaaaggaacttggtgaccagggtaagcagagaacgcaggcctc 311
Query: 181 tctaagaaacctcagagacctttagtcataataagaactgaaactctgaattgattataa 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 310 tctaagaaacctcagagacctttagtcataataagaactgaaactctgaactgattataa 251
Query: 241 agatctaggggaccctatccatatttgactcacccttgctcctgtgtcta 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agatctaggggaccctatccatatttgactcacccttgctcctgtgtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
