Query= MSMg01no187_c22.b1 MSMg01no187_c22.b1 CHROMAT_FILE:
MSMg01no187_c22.b1 PHD_FILE: MSMg01no187_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:25 2005
(315 letters)
>mm_chr4_100429026_100429734
Length = 709
Score = 543 bits (281), Expect = e-159
Identities = 301/311 (96%), Gaps = 6/311 (1%)
Strand = Plus / Minus
Query: 5 gaattcttaatacctagaggttgagaagggaagcttccagggacccttgtattgagccac 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 509 gaattcttaatacctagaggttgagaagggaagcttccagggacccttgtactgagccac 450
Query: 65 ttgagggacctggcagtcaggtacctccccagtcacacagctgtgcacatcaagccacca 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 449 ttgagggacctggcagtcaggtacctccccagtcacacaactgtgcacatcaagccacca 390
Query: 125 gcagctgaagccatcaccaattaaaacagactttttttgtttgtttgtttgttttctttt 184
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 389 gcagctgaagccatcaccaattaaaacagactt------tttgtttgtttgttttctttt 336
Query: 185 taaagctggaaactatagcaggggctgtcagtcagagacaaggtcagaacagccatgtag 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 335 taaagctggaaactatagcaggggctatcagtcagagacaaggtcagaacagccatgtag 276
Query: 245 catcacaggctggcaaggaaccagaggtccagatggggaccagttaccctccaaatccta 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 catcacagactggcaaggaaccagaggtccagatggggaccagttaccctccaaatccta 216
Query: 305 gggcagcctga 315
|||||||||||
Sbjct: 215 gggcagcctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 709
Length adjustment: 9
Effective length of query: 306
Effective length of database: 700
Effective search space: 214200
Effective search space used: 214200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_c22.g1 MSMg01no187_c22.g1 CHROMAT_FILE:
MSMg01no187_c22.g1 PHD_FILE: MSMg01no187_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:25 2005
(290 letters)
>mm_chr4_100317213_100317902
Length = 690
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%)
Strand = Plus / Plus
Query: 2 ctgcccttgatcagagagtaaggttgcccaacgtgactcagccctttttcctcagtacat 61
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 202 ctgcccttgatcagagagtaaggttgcccaacgtgactcagccctctttcctcagtacat 261
Query: 62 gcaggcaagtcaaggaaagaccatgtggctctcaggatgtcagcaatcactttaggtaga 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcaggcaagtcaaggaaagaccatgtggctctcaggatgtcagcaatcactttaggtagg 321
Query: 122 tatcaatcttcttggaaacagcaggtctccctggaaactcccttaagagtttagatgggc 181
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 322 tatcaatcttcttggaaacagcaagtctccctggaaacttccttaagagtttagatgggc 381
Query: 182 ctggagtgtaaccctgtgggtctgggtagccatggagcagtgggaagccagcctgagcaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctggagtgtaaccctgtgggtctgggtagccatggagcagtgggaagccagcctgagcaa 441
Query: 242 gagtgggattgaggtaagtccaaaccctgatactggcaagtgtagggtc 290
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 442 gagtgggattgaggcaagtccaaaccctgatactggcaagtgtagggtc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
